Gene Snas_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3035 
Symbol 
ID8884234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3201976 
End bp3202935 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511799 
Protein GI291300521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAA ATCTGGTCCT CGTCGCCGTG CTCGCGTTGG GAGTCGTGGC GGCGTGCGAC 
GGCTCCGGCA GCGCCGACAC CGAGGACGAC GGGAAGGGCT CCGCCAAGCC GTCCTTCGCC
AACGCCACCG CCGACGAACT GTCGGGGACC TTCTTCTATC TGGCCCCGCA CGACGACGGC
GCCGCGGTCT ACTCCTTCAC CGGCGACGGG AAACCCAAGC CGGTCATGAC CGGAACCGCC
GACCTGTGGT CCTCGGCGAC CCCCTCGCCC GACGGCAAGT ACATCAGCTA TGTGGAGGGT
TCCAACGCGG AATCCCCGAT GCGGATCTGG GACGTCGAGG CCGGTGAACC GTTGAAAGAG
CAACTGGCGC AGGTGGACGG CGTCTGCAAG GAGCCGGCGT GGACTCCGGA CTCCAAGCGG
CTGCTCACCC ACGCCGTGGC GGCCGACTCC CCGACCGAGG CGACGTGGTT CGACGTCGCC
TCGGGCGAGA CCAGCAAGGC CGACGTCGTC GACGGCTGCC ACCCGAAGTT CCCCGTCGGA
GGCGACGACA CCGTCTACAC CTTCATGACC GGGGACGTCA CCGGTCTGGT CATGCGCGAC
GGAAAGAAGG AGACGACCCT GCCCGCCGAG GTCGTCAAGG GCCGCACCAT CATCGACCCG
GTCGCCGTGG CCCGCGACAA CGCCGGACTG TGCGTGGCGA CCGCCGCCGA GGGCGAACCG
GTCGGCGACG CCGCCCGCAG CCTCAGCTGC GACACCATAG TAGACACCAA GACGAAGAAA
CCCGTGAAAC TGCCCGACAC CATCACCGGC GCGGTGTTCC CCGAGTCGGG CGGATTCATC
ACCCGCACCG GCGACGGCGA ACTGAAACTG TCCGACCTGG ACGACAGCGG CATCGCGACC
CTCGAGGAGC CGTCGGAACT GGCCGAGGGC TTCCTGATCG GCTACGCCGA ACCCGCGTGA
 
Protein sequence
MPRNLVLVAV LALGVVAACD GSGSADTEDD GKGSAKPSFA NATADELSGT FFYLAPHDDG 
AAVYSFTGDG KPKPVMTGTA DLWSSATPSP DGKYISYVEG SNAESPMRIW DVEAGEPLKE
QLAQVDGVCK EPAWTPDSKR LLTHAVAADS PTEATWFDVA SGETSKADVV DGCHPKFPVG
GDDTVYTFMT GDVTGLVMRD GKKETTLPAE VVKGRTIIDP VAVARDNAGL CVATAAEGEP
VGDAARSLSC DTIVDTKTKK PVKLPDTITG AVFPESGGFI TRTGDGELKL SDLDDSGIAT
LEEPSELAEG FLIGYAEPA