Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3018 |
Symbol | |
ID | 8884217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3182474 |
End bp | 3183811 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003511782 |
Protein GI | 291300504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.138162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.213717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACC GATACCGAAA CTTCGCCAAC TCCGCCGTGG GACGTCAACT GGTGCGCCGA CTCGGTCTGC CCCGGCCGTC GCCGCTGCGC CGTCAGCGCC CCGACGCCCC GGCGCTGCCG GGCCCGGTGC TGTTGGGCGG CCACGACGTG GCGGAGCTGG AACACGTGCT GGCCAAGCGG CTCAGCGCCG AGGTGCACAC CGCCGAGACC AAGGCTTCGG CCGAGGCACG TTACGCCGGA CTGGTCTTCG ACGCCTCGGA CCTCACCACG ATCGCGGGCC TGTCGGAGCT GTACGCGTTC TTCCACGACC GGCTGGAGCG GCTGGCCAGC TGCGGGCGGG TGCTGGTGCT GGGCGCGATC CCCGACGAGA CAGGCGATCC CGAGGCCGCC GCCACCCAGG CGGCGCTGGA GGGATTCACC CGTTCGCTCG GCAAGGAACT GCGTGCGGGC GGCACCGCGC AACTGCTGCG GCTGGCGCCC GGGGCCCGCG ACGGCCTGGA CGCGACCCTG CGGTTCTTCC TGTCGTACCG GTCGGCGTTC GTGTCCGGCC AGGTGGTCAC CGTCGCGGCC ACCGAGCCCG GCGAGGTGCC GGATCCGGCG CGTCCGCTGG ACGGCAAGGT CGCGCTGGTG ACCGGCGCGG CGCGCGGCAT CGGCGCCGTC ACCGCCCGCA CCCTCGCCGA CCAGGGCGCG ACGGTGGTGT GCCTCGACGT CCCCGAGGCG GGCGAGAAAC TGGCCACCGT GGCCGGTGAC ATCGGCGGCA GCGCCCTGCA ACTGAACCTG GCCACCGACG ACGCGCCGTC CACACTGTCG CGGTGGCTGG AGGAGCGCCA CGGCGGCGTC GACATCGTCG TCCACAATGC CGGTATCACC CGGGACAAGA CCCTGGCCCG CATGGACGCC AAGCGCTGGG ACTCGGTGCT GGGCGTCAAC CTGGCCGCGC CGCACCGCGT CACCGCCGAC CTGCTCGACC GCGGCGTGCT GCGCGACGGC GGCCGGGTCG TGGTGCTGTC GTCGGTGTCG GGCATCGGCG GCAACCGGGG CCAGACCAAC TACGCCGCCA GCAAGGCCGG GCTCATCGGC CTGGTGCGCG CGCTGGCGCC GGGCCTGGCC GAGCGCGGCA TCACGGCCAA CGCGGTCGCG CCGGGATTCA TCGAGACCCG CATGACCGCC GCGATGCCCG TGATGGAACG CGAGGCCGGG CGGCGACTGT CGAGTCTGGC CCAGGGCGGG CTGCCGGTCG ACGTCGCCGA GACCATCGCG TGGCTGGCGC ACCCGGGTTC GGCGGGCGTC ACCGGCAACG TGGTGCGCGT GTGCGGGCAG AGCTTCCTGG GGGCCTGA
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Protein sequence | MPDRYRNFAN SAVGRQLVRR LGLPRPSPLR RQRPDAPALP GPVLLGGHDV AELEHVLAKR LSAEVHTAET KASAEARYAG LVFDASDLTT IAGLSELYAF FHDRLERLAS CGRVLVLGAI PDETGDPEAA ATQAALEGFT RSLGKELRAG GTAQLLRLAP GARDGLDATL RFFLSYRSAF VSGQVVTVAA TEPGEVPDPA RPLDGKVALV TGAARGIGAV TARTLADQGA TVVCLDVPEA GEKLATVAGD IGGSALQLNL ATDDAPSTLS RWLEERHGGV DIVVHNAGIT RDKTLARMDA KRWDSVLGVN LAAPHRVTAD LLDRGVLRDG GRVVVLSSVS GIGGNRGQTN YAASKAGLIG LVRALAPGLA ERGITANAVA PGFIETRMTA AMPVMEREAG RRLSSLAQGG LPVDVAETIA WLAHPGSAGV TGNVVRVCGQ SFLGA
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