Gene Snas_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2980 
Symbol 
ID8884179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3148692 
End bp3149891 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
ProductPhosphoglycerate kinase 
Protein accessionYP_003511747 
Protein GI291300469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.244187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0361725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACAC TGGAAACCCT GCTGGAGCAG GGTGTCACGG GTCGGCGCGT CCTGGTGCGC 
GCCGACCTCA ACGTGCCACT CGACGGCGAC CGCATCACCG ACGACGGCCG GATCCGCGGC
GTGCTGCCGA CCCTGACGGC GCTGCGCGAC GCCGGGGCCA AACTGGTGGT GTGCGCGCAC
CTGGGCCGCC CCAAGGGCGC ACCGGACGCG AAGTACAGCC TGGCGCCGGT GGCGGTGCGG
CTGTCGGAAC TGCTGGGCAC CACGGTCGGC TTCGCCACCG ACACCGTCGG CACCGACGCC
GAACGGGCCC TGTCGGCCCT GGGCGACGGC GGCGTGGTGC TGCTGGAGAA CCTGCGGTTC
AACCCGGGTG AGACCAGCAA GGACGACGCC GAACGGCTCG ACTTCGCCAC CAAACTGGCC
GAGGGCAACG ACTTCTACGT CGACGACGCC TTCGGCGCGG TGCACCGCAA GCACGCCAGC
GTCTACGACG TCGCCACGCT GCTGCCGCAC TACGCCGGGA AGCTCATCAC CACCGAGGTG
TCGGTGCTCA AGCGGCTGAC CGAGTCGCCG CAGCGCCCCT ACACCGTGGT GCTGGGCGGC
GCCAAGGTCT CCGACAAGCT CGCCGTCATC GCCAACCTGC TGGACAAGGT GGACCGGCTG
CTCATCGGCG GCGGCATGAT GTTCACCTTC CTGGCCGCGC AGGGCCACGA CGTCGGCACC
TCACTGCTGG AGTCCGACCA GATCGACACC TGCAAGGGCT TCCTGGACGA GGCCGCCAAA
CGCGGCGTCG AACTGGTGCT GCCGAGCGAC ACCATCACGG CCGCCCAGTT CAGCGCCGAG
GCCGAGCCGG AGACGGTCGC GGTCGACGCG ATCCCGTCTG ACCGGATGGG CCTGGACATC
GGCCCCGAGA CCGCCGCCCG GTTCGCCGTC GAGATCGGCA AGTCCAAGAC GGTGTTCTGG
AACGGCCCGA TGGGCGTGTT CGAGTTCTCC GCCTTCGCCG ACGGCACCAG GACGGTGGCA
CGGGCGCTTG TGGACTCGGA CGCCTTCACC GTCGTGGGCG GCGGCGACTC CGCGGCGGCG
GTGCGCACCC TCGGCCTGCC CGAGGACGGC TTCGGCCACA TCTCCACCGG CGGCGGTGCC
AGCCTGGAGT ACCTGGAGGG CAAGACCCTC CCCGGACTGT CGATACTGGA GTCACAATGA
 
Protein sequence
MRTLETLLEQ GVTGRRVLVR ADLNVPLDGD RITDDGRIRG VLPTLTALRD AGAKLVVCAH 
LGRPKGAPDA KYSLAPVAVR LSELLGTTVG FATDTVGTDA ERALSALGDG GVVLLENLRF
NPGETSKDDA ERLDFATKLA EGNDFYVDDA FGAVHRKHAS VYDVATLLPH YAGKLITTEV
SVLKRLTESP QRPYTVVLGG AKVSDKLAVI ANLLDKVDRL LIGGGMMFTF LAAQGHDVGT
SLLESDQIDT CKGFLDEAAK RGVELVLPSD TITAAQFSAE AEPETVAVDA IPSDRMGLDI
GPETAARFAV EIGKSKTVFW NGPMGVFEFS AFADGTRTVA RALVDSDAFT VVGGGDSAAA
VRTLGLPEDG FGHISTGGGA SLEYLEGKTL PGLSILESQ