Gene Snas_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2978 
Symbol 
ID8884177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3146536 
End bp3147516 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511745 
Protein GI291300467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.033806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGA CGGCTTCCGT CAAGGATGAA CTGAGCCGCA TAGACAACAG CAAACCGTGC 
TGCCGACGCT CCGAGATGAG CGCGCTGTTC CGGTTCGCCG GGGGACTGCA CCTGGTGGGC
GGTTCACTGG TGGTGGAAGC CGAACTGGAC GCGGGCAGCG TGGCGCGGCG GCTGCGGGCC
GCCATCCAGG ACGCCTACGG CTACGACAGC GAGATGCAGG TGCTCACCGC CGGTGGCCTG
CGCCGCCACA CCCACTACGT GCTGCGGGTC ATCAACGACG GCGAGGCCCT GGCCCGCCAG
ACCGGCCTGC TGGACGCCCG GGGCCGCCCG GTGCGGGGCC TGCCCGCCCA CGTGGTGGCC
GGGAACCTGT GCTGCGCCGA GGCCGCCTGG CGGGGCGCGT TCATGGCCCA CGGCTCCCTG
ACCGAACCGG GCCGCTCCAG TTCGCTGGAG ATCACCTGCC CGGGCCCGGA ATCGGCGCTG
GCGCTGGTGG GCGCGGCCCG GCGACTGGGC ATCACCGCCA AGGCCCGCGA CGCCCGCGGC
GTCGACCGGG TGGTCATCCG CGACGGCGAC GCCATCGGCC AGCTGCTGGT GCGGCTGGGC
GCCCACGCCG GGGTGCTGGC CTGGGAGGAA CGCCGGGTGC GGCGCGAGGT GCGTGCCACC
GCCAACCGGC TGGCCAACTT CGACGACGCC AACCTGCGCC GCTCGGCCCG CGCGGCGGTC
GCCGCCGCCG CGAAGGTCTC CAGAGCCCTG GAACTGCTGG GCGACGAGGT TCCCGGCCAC
CTCGCCGAGG CCGGACGGCT GCGGCTGGCC AACCGGCAGG CGTCCCTTGA GGAGCTCGGC
GCCATGGCCG ACCCGCCGCT GACCAAGGAC GCCATCGCCG GGCGGATCCG CCGCCTCATC
AACCTCGCCA ACAAGCACGC CGCCGCGGCC GGGGAACCGC CGGTGGAGGC CGTCGTCACC
GACGAGATGC TGGTGGCCTG A
 
Protein sequence
MAMTASVKDE LSRIDNSKPC CRRSEMSALF RFAGGLHLVG GSLVVEAELD AGSVARRLRA 
AIQDAYGYDS EMQVLTAGGL RRHTHYVLRV INDGEALARQ TGLLDARGRP VRGLPAHVVA
GNLCCAEAAW RGAFMAHGSL TEPGRSSSLE ITCPGPESAL ALVGAARRLG ITAKARDARG
VDRVVIRDGD AIGQLLVRLG AHAGVLAWEE RRVRREVRAT ANRLANFDDA NLRRSARAAV
AAAAKVSRAL ELLGDEVPGH LAEAGRLRLA NRQASLEELG AMADPPLTKD AIAGRIRRLI
NLANKHAAAA GEPPVEAVVT DEMLVA