Gene Snas_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2902 
Symbol 
ID8884101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3052697 
End bp3053662 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003511670 
Protein GI291300392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.187711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.331518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCG AGATCCGGCA CCTGCGGGCG ATCTGCGCCA TCGCCGACGC CGGAAGCCTG 
TCCAAGGCCG CCCGCGTCCT CGGTATCTCG CAACCGGCGC TGTCAGCCCA GCTCAAACGC
ATCGAGCGCA TCGTCGGCGC CGAACTGTTC GTCCGCGCCC GGTCGGGCGT CGTGCCCACA
CCCGACGGGG AGCGCACCCT GGAGCGAGCC CGGATGCTGC TCGTCGAACT GGACGCGTTC
GTCGGCGGAC TGCGCCATCC GAACGGCCGC ACCAGAACCG CGCTGCGGCT GGGTTCGGCC
CATATGGAGT GTGTCGGCAC CATGATCGAA CTGGTGCGCA AGGCGTTGCC CGAGTACGAG
GTTCGGCTGC GTGTCGAACC CTCGGCGGTG ATCCTGGCCC AGGCCGTCAC CCACGACCGG
ATGGACCTGG CGGTGATCGG CACCATGGTG GACCACGACG TGCGGCTGGC GCCGCCGGTC
GAGCAACGCG TCCTGGTGCC ACAGGTGCCG GTGTTCGTGG CCATCGCCAG CGGTCACGCG
CTCGCCTCCC GGCCCGAGAT CGCACTGTCC GAACTGGCCG GTGAGTCGTG GATCTGTCCG
CCCGGCGCCG ACGACGGCTC GCTGGCCTCG TTGCGGGATG CCTGCCGCCA CGCGGGTTTC
GAGGCGAGGG TCGACTACGA GGCGCCCAGT GGCGGTGCCC GGCAGCTCAT CGAGTCCGGG
CAGGGCGTGC GGCTGGTCGA ACCCACCGCG AGCCAGGAAC CGGGTATCGC GGTGCGGCCG
CTGACCGGCG ATCCGCTGCA CATGCGGTAC CGCTTGGCCT GGCGGTCGGG ACGCTTCACC
GACATCGAAC TGGGCCGGGT GTACCGGGCG GTCGGGCAGG CGTACACCAG CCACGCCGTC
GGCAGCCCGG TCTTCGCGCC GTGGTGGCAG CGGCATCCCG AGGTGCATCC GCTCGCCGGT
GCTTAG
 
Protein sequence
MDPEIRHLRA ICAIADAGSL SKAARVLGIS QPALSAQLKR IERIVGAELF VRARSGVVPT 
PDGERTLERA RMLLVELDAF VGGLRHPNGR TRTALRLGSA HMECVGTMIE LVRKALPEYE
VRLRVEPSAV ILAQAVTHDR MDLAVIGTMV DHDVRLAPPV EQRVLVPQVP VFVAIASGHA
LASRPEIALS ELAGESWICP PGADDGSLAS LRDACRHAGF EARVDYEAPS GGARQLIESG
QGVRLVEPTA SQEPGIAVRP LTGDPLHMRY RLAWRSGRFT DIELGRVYRA VGQAYTSHAV
GSPVFAPWWQ RHPEVHPLAG A