| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2890 |
|---|
| Symbol | |
|---|
| ID | 8884089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3041980 |
|---|
| End bp | 3043530 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003511658 |
|---|
| Protein GI | 291300380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0580102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGA ACATCCTGCG AATGCGGGGA ATCGGCAAGG AATTCCCCGG CGTCCGCGCC
CTCGACGACG TCAACCTGGA CGTCAGGCGC GGCGAGATCC ACGCCCTCGT CGGCGAGAAC
GGCGCCGGGA AGTCCACTTT GATGAAGGTC CTCAGCGGCG TCTACCGGTA CGGCGAGTAC
ACCGGTGAGA TCCTCCTGGA CGACAAACCG GCGCGGTTCA AGGACATCCG TGGTTCCGAG
GCCGCCGGGA TCGTCATCAT CCACCAGGAA CTGGCGCTGA TTCCGCAACT GTCCATCGCC
GAGAACATCT TCCTGGGCAA CGAACGGTCC CACACCGGAA TCGTCGACTG GCGCGCCACC
AACCTCGCCG CCCAGGAGCT CATGGCCACG GTGGGGCTTC GGGCCGACCC GCAGGCACTG
GTGTCGGGCA TCGGCGTCGG CAAGCAGCAA CTGGTCGAGA TCGCCAAGGC GCTGTCGAAG
AACGTGCGGC TGCTGATCCT CGACGAACCC ACCGCCGCCC TCAACGAGAC CGACAGCGCC
AACCTGCTGC GGCTGCTGGA ACGCCTGCGG GAACAGGGAA TCACCTGCAT CCTCATCTCG
CACAAGCTCG GCGAGGTGCT GTCGGTGGCC GACTCGATCA CGATCCTGCG CGACGGGAAG
ACGATCGAGA CCCTCGACGT CGGCACCGAC GAGGTCGACG AGGACCGCAT CATCAAGGCG
ATGGTGGGCC GGGACCTGGA ACACCGGTTC CCGCCCCGGC GCCCCGACAT CGGCGAGGTG
CTGTTCGAGA TCCGGGACTG GAACGTGTTC CACCCCGAAC ACGGTGACCG CAAACTGGTA
CACGACGCGA ACCTGCGGTT CCGGCGCGGC GAGATCGTCG GCCTGGCCGG GCTGATGGGC
GCCGGACGCA CCGAACTGGC GATGAGTGTC TACGGACGCT CGTACGGCGA CAGGATCTCC
GGCGAGGTCC GCAAGCACGG CAGACCGATC CGGGTCCACA CCGTCGCCGA GGCCATCCGC
AACGGCATCG CCTACGTCAC CGAGGACCGC AAGCAGTACG GCCTGCTGCT GGAGGAGGAC
ATCCGCCGCA ACATCACCCT CGCCGACCTG CGGCAGGTCT CCAAACGCTC CATCATCGAC
GTCCACAAGG AAGTCATCGA GGTGGAACGG CTGCGCGATC GACTGCGCAT CAAGACACCC
ACCATCTCCC AGAAGGCCAG GAACCTGTCG GGAGGCAACC AGCAGAAGGT CGTCCTCGGC
AAGGCGGTGT TCTCCCGCCC CGAACTGCTG ATCCTGGACG AACCGACGCG CGGCATCGAC
GTCGGCGCCA AGTACGAGAT CTACACGATC ATCCACCAGC TCGCCGCCGA GGGGAAGGCC
GTGCTGGTCA TCTCCTCGGA ACTGCCGGAA CTACTGGGAC TGTGCGATCG CGTCTACGCG
ATGAACCAGG GCCGCATCAC CGGTGAGCTA CCCCGCGAAG CCGCCACTCA GGAAGAGGTA
ATGAGGTTGA TGACCAACAG CCCGGCCACG GCCAAGGCGG TGGAGAAATG A
|
|---|
| Protein sequence | MTRNILRMRG IGKEFPGVRA LDDVNLDVRR GEIHALVGEN GAGKSTLMKV LSGVYRYGEY
TGEILLDDKP ARFKDIRGSE AAGIVIIHQE LALIPQLSIA ENIFLGNERS HTGIVDWRAT
NLAAQELMAT VGLRADPQAL VSGIGVGKQQ LVEIAKALSK NVRLLILDEP TAALNETDSA
NLLRLLERLR EQGITCILIS HKLGEVLSVA DSITILRDGK TIETLDVGTD EVDEDRIIKA
MVGRDLEHRF PPRRPDIGEV LFEIRDWNVF HPEHGDRKLV HDANLRFRRG EIVGLAGLMG
AGRTELAMSV YGRSYGDRIS GEVRKHGRPI RVHTVAEAIR NGIAYVTEDR KQYGLLLEED
IRRNITLADL RQVSKRSIID VHKEVIEVER LRDRLRIKTP TISQKARNLS GGNQQKVVLG
KAVFSRPELL ILDEPTRGID VGAKYEIYTI IHQLAAEGKA VLVISSELPE LLGLCDRVYA
MNQGRITGEL PREAATQEEV MRLMTNSPAT AKAVEK
|
|---|
| |