Gene Snas_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2878 
Symbol 
ID8884077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3031231 
End bp3031716 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID 
ProductCupin 2 conserved barrel domain-containing protein 
Protein accessionYP_003511646 
Protein GI291300368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.505096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT ACCCCAAGCC GGTGCTCGTC CGCGCCGCCG AGGCCGAGAC CCTTCAGGAC 
GGACCCACCA GCCTGCTCAC CCTGCTGGCC GACTCCGACA CCACCGGCGA CGCGATGACC
GTCAACCGGG CCACCCTGTC GGACGGTTCC CCCGGCGCGC CGCCGCACTT CCACACCCGC
GCGGCCGAGG CGTTCTTCAT CATCGACGGC GCGATGCGGA TGCTGCTGGG CGACACCATC
ACCACGCTCC ACAAGGGTGA CTTCCTGGTA GTGCCGTCGA TGCTGCCGCA CGCGTTCGCG
CCGGTCCCCG GCGGATCGGC CGACGCGCTG GTCGTGTTCA GCCCCGGCAT GGCCCGGTTC
GACTACTACC GGCTGCTGGA GCGGGTGTTC AAGGGCATGT CGGACATCAG CGAGATCGCC
GCCAGCTCCG GCCGGTACGA CAACCACTAC TGCGACAGTC CGGTGTGGCG CGAGGCACTG
ACCTAG
 
Protein sequence
MSDYPKPVLV RAAEAETLQD GPTSLLTLLA DSDTTGDAMT VNRATLSDGS PGAPPHFHTR 
AAEAFFIIDG AMRMLLGDTI TTLHKGDFLV VPSMLPHAFA PVPGGSADAL VVFSPGMARF
DYYRLLERVF KGMSDISEIA ASSGRYDNHY CDSPVWREAL T