Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2878 |
Symbol | |
ID | 8884077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3031231 |
End bp | 3031716 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Cupin 2 conserved barrel domain-containing protein |
Protein accession | YP_003511646 |
Protein GI | 291300368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.505096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT ACCCCAAGCC GGTGCTCGTC CGCGCCGCCG AGGCCGAGAC CCTTCAGGAC GGACCCACCA GCCTGCTCAC CCTGCTGGCC GACTCCGACA CCACCGGCGA CGCGATGACC GTCAACCGGG CCACCCTGTC GGACGGTTCC CCCGGCGCGC CGCCGCACTT CCACACCCGC GCGGCCGAGG CGTTCTTCAT CATCGACGGC GCGATGCGGA TGCTGCTGGG CGACACCATC ACCACGCTCC ACAAGGGTGA CTTCCTGGTA GTGCCGTCGA TGCTGCCGCA CGCGTTCGCG CCGGTCCCCG GCGGATCGGC CGACGCGCTG GTCGTGTTCA GCCCCGGCAT GGCCCGGTTC GACTACTACC GGCTGCTGGA GCGGGTGTTC AAGGGCATGT CGGACATCAG CGAGATCGCC GCCAGCTCCG GCCGGTACGA CAACCACTAC TGCGACAGTC CGGTGTGGCG CGAGGCACTG ACCTAG
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Protein sequence | MSDYPKPVLV RAAEAETLQD GPTSLLTLLA DSDTTGDAMT VNRATLSDGS PGAPPHFHTR AAEAFFIIDG AMRMLLGDTI TTLHKGDFLV VPSMLPHAFA PVPGGSADAL VVFSPGMARF DYYRLLERVF KGMSDISEIA ASSGRYDNHY CDSPVWREAL T
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