Gene Snas_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2858 
Symbol 
ID8884057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3008495 
End bp3009670 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511626 
Protein GI291300348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.174477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAAC GATTCGGCGG GCGCTGGTGG CTGGTCGGCG CGATCACGGT AGCGGTGGCC 
GGGCTGGCCG CGACGACGCT GACGGTCATC GGCAGTGGCG ACAGCGGCAA CGGCGGCGAC
AGCGCCTCCC TGTCCAAGCT GGACACCAAG ACCGTTCCCC CCGATGCTGG GTCATGCGAC
GTGGAGTTGC TCGACTGGCC CGCGGAGGGC GAGCCGGGAT TCGACCTCAA GATGAGCCCG
AACGGTGAGT ACATTGTCAC GGACACTCCC GGCTCATCCG ATTTCGTCAT GTGGCACAAC
GGCAAGCTGA CCGTTGTCAG TGACGTTCCC GGCGAGGGGG ACGCTTCGGT CAGCGGCGTC
AACAGTCAGG GCGTCGTGAT AGGAACCAGA TCCGGGTCGG ACGGTTCCAC GGCCTACGAG
GCGTGGCGGT ACGAGGACGG AGAAGCCAGC GAGTTGAGGG GATCCGGAGG CTCAGCGGTG
TTGGACCTCG CCGCCGTCAA TGACGAGGGA ACCATCGTCG CGGCGGAACC GGCGGGGAGT
TCTTCCGGAG ATGATCTCTA CGGCAACGGA ATACTGACGT GGGCGCCCGG CGATACCGAG
GCCACCACGG TGTCACTGTC CACCACCACC AGCGGGCGCG CTCCAACCGT CAGGGACATG
TCAAACGACG GCACGCTGGT GGGTGGACAG TTCAGCGAGG AAATGATGGA CGCCGCGGGC
GAAGGCGACT ATCAAGCTCG CATGTGGGAC TCCAGCGGAA AAGCCACCGC CATTCCCATA
GGTGAATACG ATGCCTTGGC TTCGGACGTG GCCGGAGATT GGGTGATCGC CTCCGGGGAA
TCGAACTCGT ACCGATTGAC GACCACCGCG AAACCGGTGC CGGAGAAGCT CGGCGGTTTC
ACCGCCACGG CCGTCGACAC GTCCGGCCGG GCCTACGGCG GCGTCGTCTC ACCGACCGGC
GAAGACGAGA ACGGCGACGG CATAGACGAT GATCCGGACC AGCATGTTCC GGGTGTCTTC
GACTCCAAGG CCCGTCCGCT ACCCGTCGTC GAAGACGTGA AGCCGCTGCA TCAGGACGTG
CCGTACGGCC TCGACATCGT CACCGCGGCA TCCGAGGACG GAGCGAAGCT CGCGGGCAAC
TGGAAGGGCA ACCCCGTCAT GTGGACCTGC GGCTAG
 
Protein sequence
MTKRFGGRWW LVGAITVAVA GLAATTLTVI GSGDSGNGGD SASLSKLDTK TVPPDAGSCD 
VELLDWPAEG EPGFDLKMSP NGEYIVTDTP GSSDFVMWHN GKLTVVSDVP GEGDASVSGV
NSQGVVIGTR SGSDGSTAYE AWRYEDGEAS ELRGSGGSAV LDLAAVNDEG TIVAAEPAGS
SSGDDLYGNG ILTWAPGDTE ATTVSLSTTT SGRAPTVRDM SNDGTLVGGQ FSEEMMDAAG
EGDYQARMWD SSGKATAIPI GEYDALASDV AGDWVIASGE SNSYRLTTTA KPVPEKLGGF
TATAVDTSGR AYGGVVSPTG EDENGDGIDD DPDQHVPGVF DSKARPLPVV EDVKPLHQDV
PYGLDIVTAA SEDGAKLAGN WKGNPVMWTC G