Gene Snas_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2849 
Symbol 
ID8884048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2999696 
End bp3000439 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511617 
Protein GI291300339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.511604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT TGTCGGTCGA GAACCTGAGC CGCAGTTATG GCAAGCTCCG CGCCCTGGAC 
GGGGTCGTCC TGACCGTGGA CGAGGGCGCG CGGCACGCGC TGATCGGCTG CAACGGCGCC
GGGAAGACCA CGTTGCTGCA CCTGCTGGCG GGGACCATCC GCGCCAGCGG CGGCCGGATC
CACTACCGCG GCAAGAACAT CACCCGACTG AATCCGGCGC GCCGGGCCCG GCTGGGCATC
GCCCGGTCGT TCCAGACCCC GGCCGTCTTC GACTCGCTGA CCGCCTTCGA CAACCTGACC
GTCGCCGCGA CCCCGCATCT GGCCGGGGCG CCGTGGCGGC TGGCCTCCCG CGCCGCCCAG
GCGCGCGACC GCGCCGAGGA ACAGATCGAA CTGCTGGGCA TCGCCGACTG CGCGCCCCGG
CTGGCCGGGG AACTATCACA CGGGCAACGA CGGCTGGTCG AGATCGGTAT GGCCCTGGTC
TCGCGGCCCC GACTGCTGCT TTTGGACGAA CCCGCCGCCG GACTGACCGA CACCGACATG
GAGCGACTGC TGGAGGCCCT GCGGCAGTTG CCCACCGAAC TCGCGGTGGT CCTCGTCGAG
CACCACCAGG ACCTGGTCAC CGAGATCGCC GACACTGTGA CCGTGCTCCA CGAGGGACAG
ATCCTCGCGG AGGGGTCGCC GGAGGAGATC GCGGCCGACC CGCAGGTTGC CGAGGCCTAC
CTGGGCACTG GAGTGACACC ATGA
 
Protein sequence
MTLLSVENLS RSYGKLRALD GVVLTVDEGA RHALIGCNGA GKTTLLHLLA GTIRASGGRI 
HYRGKNITRL NPARRARLGI ARSFQTPAVF DSLTAFDNLT VAATPHLAGA PWRLASRAAQ
ARDRAEEQIE LLGIADCAPR LAGELSHGQR RLVEIGMALV SRPRLLLLDE PAAGLTDTDM
ERLLEALRQL PTELAVVLVE HHQDLVTEIA DTVTVLHEGQ ILAEGSPEEI AADPQVAEAY
LGTGVTP