Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2843 |
Symbol | |
ID | 8884042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2991868 |
End bp | 2993073 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003511611 |
Protein GI | 291300333 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.397563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGAC CCGATCCCTC GACCGCCACC CAGCTCGACC TCATCGCGGG CCACTTCGGC AAACGCCTCA AGTACTGGCG GCTCACCCGG CAGCTGACCC AGGCCGAACT CGCCCGCGAC CTGAACCTGG ACGGCTCCTA CGTCTCCAAA CTCGAAAGCT CCCGCCGCCG CCCCAGCCTC GACATCGCCC GACAGTGCGA CGACCTGCTC GACACCGGCG GCGAACTGGC CGACCTGCTC ACCCTCGTGG CCACCGACCC GGGCCCACCG GTGGCCACGG TCGGGGCTCC GCTGCCCACC ATCTCCCCCA CCACCGCGCG CACCACGGCC CTGCCCGCCG CGGCCCCCGC CCACGCCACG GTCTCCCTCA ACCGCCTCGC CGAGGCCTAC GCCGAGGTCG CCGCCACCAT GGGCGGCCAC CACCTCGGCG AATCCGTCGA ACGCCAGGCC CAGGAGATCA TCGGCCGCCA CATCGGCAGC CCCGAGTCCC TCTCCGGCGG CCTGCTGCGC ACGGCGGCCC GCTTCGCCCG GCTGGCCGCC GCCATCCGCC TCGACTCCCT CGACGAGGCC GGAGCCCTCT ACTGGAACGA CTGCGCGGGC CGCTGGGCCC TCGACGGCGG CGACCCCGCC CTGTCGGCCG AGATGTGCGC CCGCACCGCC ATCGTCTACG CCCACCGCGA CAACGCCCCC ACCGCTCTCA CCCTCGCCAC CCGCGCCGAA CAACTGGCCC CCCACGCGCC CACCGCCACC GTCTGGTCCC TGCTCGCCCA GGCCCACGCC CACGCGGCCT CCGCCGAGCC CGACCAGACC ACCGGCGCAC TCGCCACCGC CCACAAGCTA CTGACCGAAC TCGACAGTCC ACTGATGGCA AACCCGTCCA CCTACAGCGA CAACCACCTC TGGCACTGGC ACGCCGGACT CTGCCACCTC ACCCTCGCCC GCCACGACAT CGACCGCACC ACCAACGCCA ACCGCGCCCT GGACCAACTC CGGCAAGCAC TGTCCGAAGT GTCCGTCTAC CACACCCGCG AACTGGCCCT CACCCGTCTG GCCCTGGCCC ACGCCTACCT CCACGCCGAC GACCCCGTCT CGGCCACCGC CGAACTCACC GAAGCCGCCA CCCTGGCCCG CGCCTGCACG TCACCCCGCC TCCACACCGA GCTCGCCCAG ACCACCACCA TCCTGGCCAC GACCACCCAT AAATAA
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Protein sequence | MPGPDPSTAT QLDLIAGHFG KRLKYWRLTR QLTQAELARD LNLDGSYVSK LESSRRRPSL DIARQCDDLL DTGGELADLL TLVATDPGPP VATVGAPLPT ISPTTARTTA LPAAAPAHAT VSLNRLAEAY AEVAATMGGH HLGESVERQA QEIIGRHIGS PESLSGGLLR TAARFARLAA AIRLDSLDEA GALYWNDCAG RWALDGGDPA LSAEMCARTA IVYAHRDNAP TALTLATRAE QLAPHAPTAT VWSLLAQAHA HAASAEPDQT TGALATAHKL LTELDSPLMA NPSTYSDNHL WHWHAGLCHL TLARHDIDRT TNANRALDQL RQALSEVSVY HTRELALTRL ALAHAYLHAD DPVSATAELT EAATLARACT SPRLHTELAQ TTTILATTTH K
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