Gene Snas_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2643 
Symbol 
ID8883838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2778815 
End bp2779552 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511413 
Protein GI291300135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAA TCGGGCGCAC GGACACCGAG GTGGTGCGCG TCGAAGCCGT TACCAAGGAC 
TACGGCACGG TGAAGGCACT GCGAGGCGTC GACCTCGACC TGCCCGGCGG CGGCTTCACC
GCCGTGATGG GGCCCTCGGG CTCGGGCAAG AGCACACTGT TGCACTGCGC CGCCGGACTC
GACCGGCCCA GCTCCGGCTC GGTGTGGCTG GGCGCCACCG ACCTGGCGAC GCTGTCGGAG
ACGGCACTGA CCGAGTTGCG CCGCACCAGG ATCGGCTTCA TCTTTCAGGC GTACAACCTC
ATCGGATCGC TGACCGTCGA ACAGAACATC ACGCTGCCGC TGCGGCTGGC CGGGGCCCGC
GCCGACCCGG ACTGGCTGGC CGAGATCGTG ACGCAGGTGG GGCTGGACCA GCGCCTGACG
CATCGTCCGG CGCGACTGTC CGGCGGCCAA CAGCAGCAGG TCGCCATCGC GCGGGCCCTG
ATCACCCGAC CCGCCGTCGT CTTCGCCGAC GAACCGACCG GCGCACTCGA CACCCGCACC
GGCCAGCAGG TGCTGGAACT GTTGCGGCGC ATGGTCGACA CCTTCGGGCA GCGGGTACTG
ATGGTGACCC ACGACCCGGT GGCCGCCTCC TGGGCCGACC GGGTGGTGTT CCTCGCCGAC
GGGAAACTCG CCGGGGAACT GCGCCGGCCC GATCCCGAAC AGGTGGCCGC GCGGCTGACC
ACGTTGGGGG AGTGGTGA
 
Protein sequence
MDTIGRTDTE VVRVEAVTKD YGTVKALRGV DLDLPGGGFT AVMGPSGSGK STLLHCAAGL 
DRPSSGSVWL GATDLATLSE TALTELRRTR IGFIFQAYNL IGSLTVEQNI TLPLRLAGAR
ADPDWLAEIV TQVGLDQRLT HRPARLSGGQ QQQVAIARAL ITRPAVVFAD EPTGALDTRT
GQQVLELLRR MVDTFGQRVL MVTHDPVAAS WADRVVFLAD GKLAGELRRP DPEQVAARLT
TLGEW