Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2643 |
Symbol | |
ID | 8883838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2778815 |
End bp | 2779552 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003511413 |
Protein GI | 291300135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.189012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA TCGGGCGCAC GGACACCGAG GTGGTGCGCG TCGAAGCCGT TACCAAGGAC TACGGCACGG TGAAGGCACT GCGAGGCGTC GACCTCGACC TGCCCGGCGG CGGCTTCACC GCCGTGATGG GGCCCTCGGG CTCGGGCAAG AGCACACTGT TGCACTGCGC CGCCGGACTC GACCGGCCCA GCTCCGGCTC GGTGTGGCTG GGCGCCACCG ACCTGGCGAC GCTGTCGGAG ACGGCACTGA CCGAGTTGCG CCGCACCAGG ATCGGCTTCA TCTTTCAGGC GTACAACCTC ATCGGATCGC TGACCGTCGA ACAGAACATC ACGCTGCCGC TGCGGCTGGC CGGGGCCCGC GCCGACCCGG ACTGGCTGGC CGAGATCGTG ACGCAGGTGG GGCTGGACCA GCGCCTGACG CATCGTCCGG CGCGACTGTC CGGCGGCCAA CAGCAGCAGG TCGCCATCGC GCGGGCCCTG ATCACCCGAC CCGCCGTCGT CTTCGCCGAC GAACCGACCG GCGCACTCGA CACCCGCACC GGCCAGCAGG TGCTGGAACT GTTGCGGCGC ATGGTCGACA CCTTCGGGCA GCGGGTACTG ATGGTGACCC ACGACCCGGT GGCCGCCTCC TGGGCCGACC GGGTGGTGTT CCTCGCCGAC GGGAAACTCG CCGGGGAACT GCGCCGGCCC GATCCCGAAC AGGTGGCCGC GCGGCTGACC ACGTTGGGGG AGTGGTGA
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Protein sequence | MDTIGRTDTE VVRVEAVTKD YGTVKALRGV DLDLPGGGFT AVMGPSGSGK STLLHCAAGL DRPSSGSVWL GATDLATLSE TALTELRRTR IGFIFQAYNL IGSLTVEQNI TLPLRLAGAR ADPDWLAEIV TQVGLDQRLT HRPARLSGGQ QQQVAIARAL ITRPAVVFAD EPTGALDTRT GQQVLELLRR MVDTFGQRVL MVTHDPVAAS WADRVVFLAD GKLAGELRRP DPEQVAARLT TLGEW
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