Gene Snas_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2538 
Symbol 
ID8883733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2676642 
End bp2677463 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID 
Producturate oxidase 
Protein accessionYP_003511312 
Protein GI291300034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.224132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.25642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAC TCGACGTCAA CCAGTACGGC AAGGCCGAGA CCCGGGTGGT GCGGCTGTGC 
CGGGACACCC CGCGTCACGA GATCCGGGAC CTCAACGTGT CGATCGCGTT GTCCGGCGAC
CTCACCGACG TCCACCTGTC CGGCGACAAC TCCCACGTCG TGCCCACCGA CACCCAGAAG
AACACCGTCT ACGCCTTCGC CCGCGCAGGT ATCGACCAGG TCGAGACCTT CGGGCTGCGG
CTGGCCCGGC ACTTCGTCGA CGAGTTCGAC CCCATCCACG GTGCCTCGGT CGACCTGGAC
GAGTACGCCT GGCAGCGGGT CGGCGACCAC TCCTTCAGTC GCGGCTCCGG AGGGGAGACC
CGCACCGCCC ACATCGGATA CGACGGGGAC GTCGCCACGG TGTCCGCCGG ACTGAAGGAC
CTGCTGCTGC TCAACTCCAC CGACTCGGAG TTCACGGGCT ACATAAAGGA CCGGTATACG
ACCCTGCCGG AGACCAAGGA CCGGATCCTG GCCACGGCCG TGTCGGCCAC CTGGGTCTAC
GCCTCCGATG ACCTCGACTT CACCCGCGCC TTCGCCGACG CGCGCGGCGC CGTCATCGCC
GCGTTCGCCG ACACCTATTC GCTGTCACTG CAACAGACCC TGTACTCCAT AGGGGAACGC
GTGCTCAGCG CGGTGCCCGA GGTGACCGAG GTGTCGCTGT CGCTGCCCAA CAAGCACCAC
TTCGTGTACG ACCTGTCCCC GTTCGGACTC GACAACCCCG GCCTCGTCTT CAACGCCGCC
GACCGCCCCT ACGGCCTCAT CGAGGGCACG GTGAAGCGAT GA
 
Protein sequence
MARLDVNQYG KAETRVVRLC RDTPRHEIRD LNVSIALSGD LTDVHLSGDN SHVVPTDTQK 
NTVYAFARAG IDQVETFGLR LARHFVDEFD PIHGASVDLD EYAWQRVGDH SFSRGSGGET
RTAHIGYDGD VATVSAGLKD LLLLNSTDSE FTGYIKDRYT TLPETKDRIL ATAVSATWVY
ASDDLDFTRA FADARGAVIA AFADTYSLSL QQTLYSIGER VLSAVPEVTE VSLSLPNKHH
FVYDLSPFGL DNPGLVFNAA DRPYGLIEGT VKR