| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2397 |
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| Symbol | |
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| ID | 8883592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 2542702 |
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| End bp | 2544423 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | choline dehydrogenase |
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| Protein accession | YP_003511173 |
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| Protein GI | 291299895 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000423609 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTGCCGG TGGACGGTGA GATCACCGGC ACCACGACGA TGAACGGGAT TTTCAAGGGA
GAAGCAGTGG CAGGCAAGAT CTTCGACTTC ATCATCGTGG GCGGCGGCTC GGCGGGAAGC
GCGCTGGCCA ACCGGCTGTC GGCCGACCCG GACAACCAGG TCCTGGTCCT GGAGGCCGGA
CGGCCCGACT GGCTGTGGGA CGTGTACGTC CACATGCCAG CGGCACTGTC CTTTCCGATC
GGTTCGAAGT TCTACGACTG GAAGTACGAG TCCGATCCCG AGCCGCACAT GAACGGCCGC
CGCGTCTACC ACGCGCGCGG CAAACTGCTG GGCGGCTCCT CCAGCATCAA CGGCATGATC
TTCCAGCGCG GCAACCCGAT GGACTACCAG CGCTGGGCCG CCGACGCCGG CATGGACGCC
TGGGACTACG CGCACTGCCT GCCGTACTTC AAACGCATGG AGACCTGCCT GGCCGACCCG
GACAATCCCT TCCGGGGCGA CGACGGGCCG CTGAAACTGG AACGCGGACC CGCGCGCGGG
CCGCTGTTCG ACGCGTTCTT CGCGGCGGCG CAGCAGGCCG GGCACGAGCT CACCGACGAC
GTCAACGCCT ACAAGCAGGA GGGCTTCGCC GCCTTCGATC GCAACGTCTA CAGGGGACGG
CGGTTGTCGG CCGCCCGGGC CTACCTGCAC CCGGCGATGA AGCGCCCCAA CCTGACCGTC
CTGACCGGAG CGACCGTCAC CAAGATCGCC TTCGACGGCG ACCGCGCCGT CGGCCTTGAC
GTGTGGCACC GCGGCAAACT GCGCGGCGTG CGCGGCGGCG AGATCATCCT GTCCGGCGGC
GCCATCAACA CCCCGCAGCT GTTGCAGCTG TCCGGGATCG GCGACGAGAC CCACCTGCGC
GAGGCCGGGG TCGACACCCG GCTGCACCTG CCCGGCGTCG GCGCCAACCT CCAGGACCAC
CTCGAGGTCT ACATCCAGCA CGCCTGCACC CAGCCGGTGT CGATGCAGCC GAACCTGCAG
CTGTGGCGAC GTCCGTTCAT CGGCGCCCAG TGGCTGTTCG CCCGCTCGGG TCCCGGTGCC
AGCAACCACT TCGAGGCCGG AGGCTTCATC CGCTCCAACC CCGACGTGGC CTACCCGAAC
CTCATGTACC ACTTCCTGCC GATCGCGATC CGCTACGACG GCACCGCGCC CACCCAGGGC
CACGGCTACC AGCTGCACGT CGGCCCCATG TACTCCGACG CGCGCGGGCA CGTGCGGATC
CGCTCCACCA ACCCGATGGA GAAACCCTCG ATCCTGTTCA ACTACCTGTC GACCGAACAG
GACCGTCGCG AATGGGTGGA GGCGATCCGA CGCAGCCGCG AGATCCTGGA ACAGCCCGCC
TTCGCCGACC TGAGCGGCGG CGAACTGTCG CCCGGCTCCG GCGTGGAGTC CGACGAGGAG
ATCCTGCGCT GGGTCGCCGA CGACGCCGAG ACCGCGCTGC ACCCATCCTG CACCGCCAAG
ATGGGCACCG GCGAGGACGC GGTCGTCGAC CCGGAATCGC TTCGGGTGCA CGGCATCCAG
GGACTGCGGG TCGTGGACGC CTCGGCGATG CCGTACATCA CCAACGGCAA CATCTACGCG
CCGGTGATGA TGCTGGCCGA GAAGGCCGCC GACGCGATCC TCGGCAACAC GCCGCTTCCG
GCCGAGAACC TCGAGTTCTA CCGGGCGCCC GCCGCCCGAT AA
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| Protein sequence | MVPVDGEITG TTTMNGIFKG EAVAGKIFDF IIVGGGSAGS ALANRLSADP DNQVLVLEAG
RPDWLWDVYV HMPAALSFPI GSKFYDWKYE SDPEPHMNGR RVYHARGKLL GGSSSINGMI
FQRGNPMDYQ RWAADAGMDA WDYAHCLPYF KRMETCLADP DNPFRGDDGP LKLERGPARG
PLFDAFFAAA QQAGHELTDD VNAYKQEGFA AFDRNVYRGR RLSAARAYLH PAMKRPNLTV
LTGATVTKIA FDGDRAVGLD VWHRGKLRGV RGGEIILSGG AINTPQLLQL SGIGDETHLR
EAGVDTRLHL PGVGANLQDH LEVYIQHACT QPVSMQPNLQ LWRRPFIGAQ WLFARSGPGA
SNHFEAGGFI RSNPDVAYPN LMYHFLPIAI RYDGTAPTQG HGYQLHVGPM YSDARGHVRI
RSTNPMEKPS ILFNYLSTEQ DRREWVEAIR RSREILEQPA FADLSGGELS PGSGVESDEE
ILRWVADDAE TALHPSCTAK MGTGEDAVVD PESLRVHGIQ GLRVVDASAM PYITNGNIYA
PVMMLAEKAA DAILGNTPLP AENLEFYRAP AAR
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