Gene Snas_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2393 
Symbol 
ID8883588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2537216 
End bp2538721 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content70% 
IMG OID 
ProductBetaine-aldehyde dehydrogenase 
Protein accessionYP_003511169 
Protein GI291299891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.284219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00642318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATC ATGCACCGTT GCCCGGACAG CCCCAGACCC TGCTGTTCAT CGGTGGCCGC 
TGGACGCCCG CCGTCGCGGG CGGCACCCGC GACATCATCG ATCCCACCAC CGGCACCGCC
ATCACGGCCG TCGCCGAAGC CGACGCCGCC GACGTCGCCG AGGCGATCGC GGCGGCCCGC
GAGGCCTTCG ACGGCGGGCC GTGGCCGCAC ACCAGCGCCG CCGAGCGCGG CGCGATCCTG
CAGACCGTCG CCCGGCTGCT GCAACGCGAC AAGCAGGCCA TCGCGGAACT GGAGTCCCGC
GACACCGGCA AGACGCTGCG CGAGGGCCTC ATCGATGTCG ACGACGTCAC CGCTGTGTTC
CGCTACTACG GCGAACTGGC CGACAAGGAC CTCGGGCGCG TCGTCGACAC CGGCAACCCG
GACGCGCAGT CGCGGGTGGT CGCCGAGCCG GTAGGCGTGT GCTCGCTGAT CGCGCCCTGG
AACTATCCGT TGTTGCAGAT GAGCTGGAAG CTGGCGCCCG CGCTGGCCGC CGGTAACACC
GTCGTGGCCA AACCCAGCGA GGTCACCCCG TTGACGACGC TCAAGCTCGT CGACCTGCTG
ACCGAGGCCG GGGTTCCGTC CGGTGTGGTC AACCTGGTGC TGGGCGCCGG TGATCCGGTG
GGACAGACCA TGGTGGAGTC CGACCGCGTC GACCTGGTGT CCTTCACCGG GGGACTGGTC
AGCGGGCGCC GGGTCGCCGC GACCGCCGCG GCCACGGTGA AGAAGGTGGC CCTGGAACTG
GGCGGCAAGA ACCCCAACGT GGTGTTCGCC GACGCCGATT TCGACGCCGC CGTCGACGGT
GCCGTCAACG CCGCCTTCGT CCACTCCGGA CAGGTGTGCT CGGCCGGTAC CCGGCTCATC
CTCCACACCG ACATCTACGA CGACTTCCTC GCCGCCGTGG CCGCCCGCGC CGACGCCATC
ACGCTCGGAC CCGGCATGGA CCCGGCCAGC GAGTGCGGCC CGCTGGTGTC GGCGGCACAG
CGCGACAAGA CCGAGACCTA TGTGGCCGGT GCGCTGGCGC AGGGCGCCCG GCTGCTGGCC
GGTGGCCGCC GCCCCGACGA TCCCGCGCTC GCGGACGGCT ACTACTACCG GCCCACCGTC
TTCGCCGACT GCCACCGCGA GATGACGGTG GTCCGGGAGG AGACCTTCGG CCCGATCCTG
ACCGCCGAGC GCTTCGCGAC CGAGGACGAG GCGATCTTCC TGGCCAACGA CACCATCTAC
GGGCTCGCGG GCGCCGTGTG GACCTCCGAC GCCGGTCGCG GCGAACGGAT CGCCGCGCGG
CTGCGGCACG GCACCGTGTG GATCAACGAC TTCCACCCGT ACCTGCCGCA GGCCGAATGG
GGAGGTTTCA AAGCCTCCGG TATCGGCCGG GAACTGGGCG TCAGCGGCCT GAACGAATAT
CGTGAATTGA AACATATCTA TAGAAACATC AACCCGAAGC CGTCGGGGTG GTTCGCGCAG
TCCTGA
 
Protein sequence
MSDHAPLPGQ PQTLLFIGGR WTPAVAGGTR DIIDPTTGTA ITAVAEADAA DVAEAIAAAR 
EAFDGGPWPH TSAAERGAIL QTVARLLQRD KQAIAELESR DTGKTLREGL IDVDDVTAVF
RYYGELADKD LGRVVDTGNP DAQSRVVAEP VGVCSLIAPW NYPLLQMSWK LAPALAAGNT
VVAKPSEVTP LTTLKLVDLL TEAGVPSGVV NLVLGAGDPV GQTMVESDRV DLVSFTGGLV
SGRRVAATAA ATVKKVALEL GGKNPNVVFA DADFDAAVDG AVNAAFVHSG QVCSAGTRLI
LHTDIYDDFL AAVAARADAI TLGPGMDPAS ECGPLVSAAQ RDKTETYVAG ALAQGARLLA
GGRRPDDPAL ADGYYYRPTV FADCHREMTV VREETFGPIL TAERFATEDE AIFLANDTIY
GLAGAVWTSD AGRGERIAAR LRHGTVWIND FHPYLPQAEW GGFKASGIGR ELGVSGLNEY
RELKHIYRNI NPKPSGWFAQ S