Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2393 |
Symbol | |
ID | 8883588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2537216 |
End bp | 2538721 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Betaine-aldehyde dehydrogenase |
Protein accession | YP_003511169 |
Protein GI | 291299891 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.284219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00642318 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTGATC ATGCACCGTT GCCCGGACAG CCCCAGACCC TGCTGTTCAT CGGTGGCCGC TGGACGCCCG CCGTCGCGGG CGGCACCCGC GACATCATCG ATCCCACCAC CGGCACCGCC ATCACGGCCG TCGCCGAAGC CGACGCCGCC GACGTCGCCG AGGCGATCGC GGCGGCCCGC GAGGCCTTCG ACGGCGGGCC GTGGCCGCAC ACCAGCGCCG CCGAGCGCGG CGCGATCCTG CAGACCGTCG CCCGGCTGCT GCAACGCGAC AAGCAGGCCA TCGCGGAACT GGAGTCCCGC GACACCGGCA AGACGCTGCG CGAGGGCCTC ATCGATGTCG ACGACGTCAC CGCTGTGTTC CGCTACTACG GCGAACTGGC CGACAAGGAC CTCGGGCGCG TCGTCGACAC CGGCAACCCG GACGCGCAGT CGCGGGTGGT CGCCGAGCCG GTAGGCGTGT GCTCGCTGAT CGCGCCCTGG AACTATCCGT TGTTGCAGAT GAGCTGGAAG CTGGCGCCCG CGCTGGCCGC CGGTAACACC GTCGTGGCCA AACCCAGCGA GGTCACCCCG TTGACGACGC TCAAGCTCGT CGACCTGCTG ACCGAGGCCG GGGTTCCGTC CGGTGTGGTC AACCTGGTGC TGGGCGCCGG TGATCCGGTG GGACAGACCA TGGTGGAGTC CGACCGCGTC GACCTGGTGT CCTTCACCGG GGGACTGGTC AGCGGGCGCC GGGTCGCCGC GACCGCCGCG GCCACGGTGA AGAAGGTGGC CCTGGAACTG GGCGGCAAGA ACCCCAACGT GGTGTTCGCC GACGCCGATT TCGACGCCGC CGTCGACGGT GCCGTCAACG CCGCCTTCGT CCACTCCGGA CAGGTGTGCT CGGCCGGTAC CCGGCTCATC CTCCACACCG ACATCTACGA CGACTTCCTC GCCGCCGTGG CCGCCCGCGC CGACGCCATC ACGCTCGGAC CCGGCATGGA CCCGGCCAGC GAGTGCGGCC CGCTGGTGTC GGCGGCACAG CGCGACAAGA CCGAGACCTA TGTGGCCGGT GCGCTGGCGC AGGGCGCCCG GCTGCTGGCC GGTGGCCGCC GCCCCGACGA TCCCGCGCTC GCGGACGGCT ACTACTACCG GCCCACCGTC TTCGCCGACT GCCACCGCGA GATGACGGTG GTCCGGGAGG AGACCTTCGG CCCGATCCTG ACCGCCGAGC GCTTCGCGAC CGAGGACGAG GCGATCTTCC TGGCCAACGA CACCATCTAC GGGCTCGCGG GCGCCGTGTG GACCTCCGAC GCCGGTCGCG GCGAACGGAT CGCCGCGCGG CTGCGGCACG GCACCGTGTG GATCAACGAC TTCCACCCGT ACCTGCCGCA GGCCGAATGG GGAGGTTTCA AAGCCTCCGG TATCGGCCGG GAACTGGGCG TCAGCGGCCT GAACGAATAT CGTGAATTGA AACATATCTA TAGAAACATC AACCCGAAGC CGTCGGGGTG GTTCGCGCAG TCCTGA
|
Protein sequence | MSDHAPLPGQ PQTLLFIGGR WTPAVAGGTR DIIDPTTGTA ITAVAEADAA DVAEAIAAAR EAFDGGPWPH TSAAERGAIL QTVARLLQRD KQAIAELESR DTGKTLREGL IDVDDVTAVF RYYGELADKD LGRVVDTGNP DAQSRVVAEP VGVCSLIAPW NYPLLQMSWK LAPALAAGNT VVAKPSEVTP LTTLKLVDLL TEAGVPSGVV NLVLGAGDPV GQTMVESDRV DLVSFTGGLV SGRRVAATAA ATVKKVALEL GGKNPNVVFA DADFDAAVDG AVNAAFVHSG QVCSAGTRLI LHTDIYDDFL AAVAARADAI TLGPGMDPAS ECGPLVSAAQ RDKTETYVAG ALAQGARLLA GGRRPDDPAL ADGYYYRPTV FADCHREMTV VREETFGPIL TAERFATEDE AIFLANDTIY GLAGAVWTSD AGRGERIAAR LRHGTVWIND FHPYLPQAEW GGFKASGIGR ELGVSGLNEY RELKHIYRNI NPKPSGWFAQ S
|
| |