Gene Snas_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2390 
Symbol 
ID8883585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2533118 
End bp2533630 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511166 
Protein GI291299888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.265375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00746099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGTCG AACGCGTTCG CGCTCCCCGC ACCGCCCCCG ATCGCGAGAT GCTCGAATCC 
TGGCTCGACT TCCACCGCGC CACCCTGCTG CTCAAGTGCG ACGGCGTCCC GACCGACCGG
CTCGCCGACC GCACGGTGCC GCCATCGAGC CTGTCCCTGC TCGGCCTGGT CCGGCACATG
GTCGACGTCG AACGGCACTG GTTCCTCCAC GTCCTGCCGG GAGTGCCCCG CGAACGCGGC
CTGTACTGGA CCGAGGACAA CCCGGACGGC GAGTTCGAGA ACATCGGCGC GGAGGACGTC
GAGGACGCGT TCAAACAGTT CGACGTCGCC TGCGAGCTCG CCCGCGAGAA CGCAGCCGGT
ATCGAGGACC TGGACTGGCA GACTCCTCCC GACCGCCACG GGCGCGTCTA CACGCTCCGC
TGGATCTACG TCCACATGAT CGAGGAATAC GCCCGCCACA ATGGACATGC CGACCTGATC
CGCGAGGCCC TCGACGGAGT CACGGGCGAA TAG
 
Protein sequence
MTVERVRAPR TAPDREMLES WLDFHRATLL LKCDGVPTDR LADRTVPPSS LSLLGLVRHM 
VDVERHWFLH VLPGVPRERG LYWTEDNPDG EFENIGAEDV EDAFKQFDVA CELARENAAG
IEDLDWQTPP DRHGRVYTLR WIYVHMIEEY ARHNGHADLI REALDGVTGE