| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2245 |
|---|
| Symbol | |
|---|
| ID | 8883439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2379911 |
|---|
| End bp | 2380537 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Rhomboid family protein |
|---|
| Protein accession | YP_003511028 |
|---|
| Protein GI | 291299750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.927336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.19661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTCA CTTCCACACC CCAGTCGACA CCGAAAGTCT CGACGAAATG GCTCAACGTC
AAGGTCGCCG CGATCTTGAC CGGGCTGTTC GTCGCCCTCA TCTGGGTGCT CGAGGCCCTC
GACTACGCGC TTCCGATCGA CCTGGACCAA TGGGGAATCC GCAGCTGGAG CATCACCGGG
ATCTTCCCCG GGTTCATCAT GGCGCCGGTG CTGCACGCCG ACTTCGACCA CCTGATCGGC
AACACCGTGC CGGTCATGGT GCTGGGATTC CTGGCCGCGA TGCGGGGCCT GCGGCACTTC
TTCACCGCCA CCGCGCTCAT CATCCTCATC GGCGGCCTGG GCGTGTGGCT CCTGAGCAGC
CCCGGAGTCC TCACCGTCGG TGCCAGCGGC ATGATCTTCG GCTACTTCGG TTACCTGGTC
GGCCGGGGCA TCCTCAGCCG CCGCGGCTGG GACATCGTAA TCGCGGTGGC CGTCATCATC
CTCTACGGCT CGATCATCTG GGGAATCTTC CCCAGCGACC CGTTCATCTC CTGGCAGGGC
CACCTGTTCG GCTTCATCGG CGGGCTCGCC GCGGCGTGGA TACTGCGCAA GAAATACCGC
AAACCCGCCG ACGAAGTCGC GGGCTGA
|
|---|
| Protein sequence | MSFTSTPQST PKVSTKWLNV KVAAILTGLF VALIWVLEAL DYALPIDLDQ WGIRSWSITG
IFPGFIMAPV LHADFDHLIG NTVPVMVLGF LAAMRGLRHF FTATALIILI GGLGVWLLSS
PGVLTVGASG MIFGYFGYLV GRGILSRRGW DIVIAVAVII LYGSIIWGIF PSDPFISWQG
HLFGFIGGLA AAWILRKKYR KPADEVAG
|
|---|
| |