Gene Snas_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2234 
Symbol 
ID8883428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2369077 
End bp2369742 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511017 
Protein GI291299739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00687189 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGACC CCTTGGGTTC CGCTCCCACG CAGGAGTTCC CGCGCATCCA CGAGGACGCG 
AGCGAGACTC GGGAAATCCC GTACGTCACG CCCTCGGGGA CCGGCACGGG CGACACCTCG
CAGGCCACCC AGCAGCTTCC GTACGTCACG CCGCAGCCCG CCACCGCGGG CCCCGGCCAC
ACGCCGCTGC CCAGCCAGGG CTGGACCCGT CCGGTGCGGC GCGGCAAAGC CGCCACGTTC
TTCGCCAAGA TCCGCAACGC CCCCGCGTGG GTGGCACCAG CGGCGCTGCT GACCTGCTTC
GCCGGGGCCG CGGCCGTCGT GGTCACCACC GACCCCACCG ACGACGTCGG CACCACCACC
TGCGCCTTCA AACTCGTCAC CGGCTTCGAC TGCCCCGGCT GCGGCGGCAC CCGGGCCTTC
TTCTACCTGC TGAACGGCAA CATCCCCGAG GCCGCCCGCA ACCACGCGAT CGCGCTGTTC
GCGGCGCCGT TCCTGGTGTG GATGTACCTG ACCTGGGCCG GACGCCGCAT GTTCCCGAAA
CTGCGCGACA AACTGCCACA GTTCCGGATC ACCGCCGCGC ACGCCACCAT GTTCCTCATC
GCCTGGGCCG TGTTCTGGAT GGTCCGCAAC CTCCCCTTCG CGCCGTTCAC CTCGCTCTAT
GTCTAG
 
Protein sequence
MSDPLGSAPT QEFPRIHEDA SETREIPYVT PSGTGTGDTS QATQQLPYVT PQPATAGPGH 
TPLPSQGWTR PVRRGKAATF FAKIRNAPAW VAPAALLTCF AGAAAVVVTT DPTDDVGTTT
CAFKLVTGFD CPGCGGTRAF FYLLNGNIPE AARNHAIALF AAPFLVWMYL TWAGRRMFPK
LRDKLPQFRI TAAHATMFLI AWAVFWMVRN LPFAPFTSLY V