Gene Snas_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2111 
Symbol 
ID8883304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2236334 
End bp2237287 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content73% 
IMG OID 
Productthiamine-monophosphate kinase 
Protein accessionYP_003510898 
Protein GI291299620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.373276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.178161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAACG ACGACAACAC GCTGACACGG GTAGGGGAGT TCGGTCTCAT CAAACGGGTC 
ACGCAACGAC TGCCCGTCCA CGATGACTGC CTGCTGGGCC CCGGAGACGA CGCGGCCGTG
GTGGCCGCCT CCGACCGCCG GGTCGTCGCC TGCACCGACG TCCTCGTCGA GGGACGGCAC
TTCCGCCGCG ACTGGTCCAG CGCCACCGAC GTCGGCCACC GCGCCGCCGC GGCCAACCTC
GCCGACATCG TGGCGATGGG GGCCCGCCCC ACCGGGCTGC TGGTGGGCAT GTGCCTGCCC
GGGGACCTGC CGGTGGAGTG GGCCGAGGAG CTGGCCGACG GCCTGGCCGC CGAGGCCGAC
CTGGTGGGCG TGAGCGTCGT GGGCGGCGAC ACGGTGTCCT CGAAGGAGCT GACGATCGCC
GTCACCGCAC TGGGCGACCT ACAGGGCCGG GCCCCGGTCA CCCGCTCGGG AGCCAGGATC
GGCGACATCG TGGCGGTGTC GGGACGGCTG GGCTGGTCGG CGGCGGGCTA CACGATCCTG
TCGCGCGGCT TCCGCTCCCC AGGAGCGCTG GTGGCCGCGC ACCGGCGGCC CGAGGTTCCC
TACGCGGCCG GACCGCTGGC CGCCGCCCTG GGCGCCACCG CCATGATCGA CGTCTCCGAC
GGGCTGCTGT CGGATCTGGG GCACATCGCC GAGTCGTCCC ACGTGTCCAT CAACGTGGAG
TCCAAGACAC TGGAGATCAC CGAGGCGATG GCCAACGCGG CCCAGGCCAT GGGCGTCGAC
CCGCTGGCCT GGGTGCTGAC CGGGGGAGAG GACCACGCCC TGGCGGCGAC CTTCCCGCCC
GACGTGCTGC TGGGCGGCGA CTGGCGGATC ATCGGCCGGG TCGGCGTCGG ACGTGGCGTC
ACAGTGGACG GTTCGGCCTA CGAGGGCTCG ACCGGCTGGG ACCACTTCCG CTAG
 
Protein sequence
MGNDDNTLTR VGEFGLIKRV TQRLPVHDDC LLGPGDDAAV VAASDRRVVA CTDVLVEGRH 
FRRDWSSATD VGHRAAAANL ADIVAMGARP TGLLVGMCLP GDLPVEWAEE LADGLAAEAD
LVGVSVVGGD TVSSKELTIA VTALGDLQGR APVTRSGARI GDIVAVSGRL GWSAAGYTIL
SRGFRSPGAL VAAHRRPEVP YAAGPLAAAL GATAMIDVSD GLLSDLGHIA ESSHVSINVE
SKTLEITEAM ANAAQAMGVD PLAWVLTGGE DHALAATFPP DVLLGGDWRI IGRVGVGRGV
TVDGSAYEGS TGWDHFR