Gene Snas_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1982 
Symbol 
ID8883174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2103061 
End bp2103420 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003510771 
Protein GI291299493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.619306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACA CCTCTCCGGT ATTCAGCCCG TCCCGCACCG CCACCGGGAC CCTCGTCTTC 
ATCTCCGGAC AACTGCCCGT TGACGTCGAC GGCACCGTAC CCCCCGACAT CGCCGCCCAG
ACCAAACTCG TCCTGGACAA CATCGAGACC AAACTGGACG AACACGGCCT CGACTGGACC
GCCGTGGTGA AACTGACCTA CTTCCTGCGC GACATCGACG ACCTGGAGGC GGTACGCGAG
ATCCTGCGCT CCGTCCTGCC GCAGCCGCGC CCGGCCGCGT CGCTGGTGGA GGTCAGCAAC
CTCGTCAACC CGCACTGCAA ACTCGAGATC GACGCGATCG CGCAGGCGAA CGCCGCCTAA
 
Protein sequence
MTDTSPVFSP SRTATGTLVF ISGQLPVDVD GTVPPDIAAQ TKLVLDNIET KLDEHGLDWT 
AVVKLTYFLR DIDDLEAVRE ILRSVLPQPR PAASLVEVSN LVNPHCKLEI DAIAQANAA