Gene Snas_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1895 
Symbol 
ID8883087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2010894 
End bp2011826 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative D-cysteine desulfhydrase (DcyD) 
Protein accessionYP_003510684 
Protein GI291299406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0834874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGG ACGTCACGCG GGGGCTGGAA CCCGTCCTGC CTTCGCCGGT CGTGGAGCTG 
CGCGACGAGC GGCTGGAGCG GCACGGGGTG CGGGTGCTGG TCAAGCGCGA CGATCTGATT
CATCCCGACG TGCCGGGCAA CAAGTGGCGG AAGCTGAAGT ACAACCTGGA AGTGGCTCGG
GAGCGTGGGT TCGCGACGCT GTTGACGTTC GGTGGGGCGT ACTCGAATCA TGTCCGGGCG
GTGGCGGCGG CCGGGCGGGC GCTGGGTTTC GCCACGGTCG GGGTGATTCG TGGTGAGGAG
CGGTTGCCGT TGAATCCGTC GCTGGAGTTC GCGGTGCGGC AGGGGATGCG GTTGACCTAT
ATGGACCGGA CGACGTATCG GCGTAAGACC GACGCCGATG TGGTCGCGGG TTTGCGGGAG
CGGTTCGGGG AGTTCTATCT GATTCCCGAG GGTGGCAGTA ATGCGTTGGC CGTCAAGGGG
TGCGCTGAGT TGCCGGGTGA GATCGACGTC GATTACGACC TCGTGTGCTG TGCGTCCGGT
ACCGGCGGGA CGCTGGCGGG TATCGCGGCC GGGTTGCCGG ACGGCAAGCG GGCCTTGGGG
TTTCAGGTGC TGAAGGGTGG CGACTTCCTC AGCGAGGAGG TGCGGCGGTT GCAGCGCGAG
GCGTACGGGA ACGTCGGCGA CAACTGGTCC ATCAACGCCG ATTTCCATTT CGGAGGGTAC
GCGAAGCGCA CGCCGGAGCT GCTGGCGTTC ATCGACGATT TCCGGGCCCG GCACGGTATC
GAGCTCGACC GGATCTACAC CGCCAAGATG ATGTGCGGAA CCTTCCGGCT CGTCGAGACG
AAGCAGATCC CCGCGGGTAC CACGGCCATC GCGATCATCG CGGGATTAGT CCCTCCCCGA
CACCCTGGAG CTGGGGTTGC GGTTTCGCGT TGA
 
Protein sequence
MNPDVTRGLE PVLPSPVVEL RDERLERHGV RVLVKRDDLI HPDVPGNKWR KLKYNLEVAR 
ERGFATLLTF GGAYSNHVRA VAAAGRALGF ATVGVIRGEE RLPLNPSLEF AVRQGMRLTY
MDRTTYRRKT DADVVAGLRE RFGEFYLIPE GGSNALAVKG CAELPGEIDV DYDLVCCASG
TGGTLAGIAA GLPDGKRALG FQVLKGGDFL SEEVRRLQRE AYGNVGDNWS INADFHFGGY
AKRTPELLAF IDDFRARHGI ELDRIYTAKM MCGTFRLVET KQIPAGTTAI AIIAGLVPPR
HPGAGVAVSR