Gene Snas_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1889 
Symbol 
ID8883081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1982770 
End bp1983291 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content72% 
IMG OID 
ProductChloramphenicol phosphotransferase family protein 
Protein accessionYP_003510678 
Protein GI291299400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0704697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC TCAACGGCGG CTCCAGTTCC GGTAAGTCCT CGATCGCGCG GTGCCTGCAG 
GACATCCTGC CGCGACCGTG GCTTGCCCTC AGCGTCGACG ACTTCGTCGA CGCGCTGCCG
GAGGCGATGC GCTCCTCCGA CGAGGGCATC GAGTTCGCCG ACGACGGCGC GGTCAACGTC
GGCGACCAGT TCCGGAAGCT GGAGGTCGCG TGGATGGCGG GCGTCGCGAC GATGGTGCGC
GAGGGCGCGC CCGTGGTCAT GGACGACGTG TTCCTCGGCG GCGCGGACTC GCAGCGACGG
TGGCGCGAGG CCCTCGACGG GCTCGACGTG CTGTGGGTCG GGGTGCGGTG CGACGGCGCG
GAGGCCGCGC GGCGGGAAAG CGCGCGCGGC GACCGGACCA CCGGTATGGC CGAGCAGCAG
GCGGAGCTGG TGCATCGCGG CGTCACCTAC GACCTGGAGG TCGACTCGAC CCACCTGTCG
GCCCGCGAAT GCGCCGAGGC CATCGCCGCC AAGCTCGGCT GA
 
Protein sequence
MILLNGGSSS GKSSIARCLQ DILPRPWLAL SVDDFVDALP EAMRSSDEGI EFADDGAVNV 
GDQFRKLEVA WMAGVATMVR EGAPVVMDDV FLGGADSQRR WREALDGLDV LWVGVRCDGA
EAARRESARG DRTTGMAEQQ AELVHRGVTY DLEVDSTHLS ARECAEAIAA KLG