Gene Snas_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1870 
Symbol 
ID8883062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1962119 
End bp1962727 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510659 
Protein GI291299381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0087636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.127946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTT ACTTCGAGCC GTTGTCCGGC GGCGGCGCCA CCATCCTGCT GGGCCAGGTC 
GAGATCTCCG TCCTGCACGG CTACGCCACC CAGCTCCTCG ACCTGCTCGG CCCCGGCCAG
GAACCGGCCC ACGGTGACGC CGAGGCCCTG CTGGCCTCCG TCTTCACCGA CCAACCCGAC
GAACCACCCA CCGACCCGGT ACTGGCCCGC CTCTTCCCCG ACGCCTACGA CGACCCCGAC
CGTCCCCCCG ACGACGAGAC CCGCGCGGCG TCCGCCGAGT TCCGCCGCTA CACCGAATCC
GACATGCGCG CCCGCAAACG CGGCGACATC CTCACCCTCA TCCGCTGCCT GGAGACCCTG
ACCCCCTCCG AACCCGACGG CACCGAACTG CGATTGAACG AGGACGAGTG CCGCCAATGG
CTGGGCGCCC TCAACGATCT GCGCCTCGCC CTCGGCACCC GCCTCGACAT CACCGGCGAC
CACGACAGCG AGGCATTCCT GCAACTCCCC GACTCCGACC CCCGCAAACC CAGCGCGATG
GTCTACCTGT GGCTGAGCGG CCTCCAGGAA ACCCTCATCG ATTCCCTCAC CGGCTCCACC
GACAACTGA
 
Protein sequence
MAGYFEPLSG GGATILLGQV EISVLHGYAT QLLDLLGPGQ EPAHGDAEAL LASVFTDQPD 
EPPTDPVLAR LFPDAYDDPD RPPDDETRAA SAEFRRYTES DMRARKRGDI LTLIRCLETL
TPSEPDGTEL RLNEDECRQW LGALNDLRLA LGTRLDITGD HDSEAFLQLP DSDPRKPSAM
VYLWLSGLQE TLIDSLTGST DN