| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1774 |
|---|
| Symbol | |
|---|
| ID | 8882964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1858969 |
|---|
| End bp | 1859931 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003510564 |
|---|
| Protein GI | 291299286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.435427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATATCTC TGTCCAAAGT ATCTAAACGT TTCGGTTCGA CGCGGGCTGT CGATGACGTG
AGTCTTGACG TGCCCGCGGC CACGATCCAC GGCGTTCTCG GCCGTTCCGG TGCCGGGAAG
TCGACGCTGT TGCGGGTGGT GAACCTGCTG GAGCCTCCCG ACTCGGGGAC CGTGACGGTC
GCCGGGCGAG ACCTGGGGAC GCTCACGCCC GCCGGACTGC GGGATGCGAG AGCCCGCATC
GGGATGGTGT TCCAGCACTT CCACCTGTTG CACAACCGGA CGGTCGCCGC GAACGTGGAG
CTGCCGCTGA AGCTGCACCG CGTCGAGCGG GGCGAGCGGC AGCGGCGGGT CGCGGAGTTG
CTGGAGCTGG TGGGCCTGTC CGATCAGGCG CGCAAGTTCC CGGCGCAGCT GTCGGGTGGT
CAGCGGCAGC GGGTGGCCAT CGCCCGGGCA CTGGCCCTGC GTCCCGACGT GTTGTTGTCG
GACGAGGCGA CCAGTGCCCT GGACCCGGGC ACGACCGTGG AGATCCTCGA CCTGTTCGTG
AAGCTGCGCG ACACGCTGGG GTTGACGATC CTGCTCATCA CGCATGAGCT GGACGTCATC
ACGCGGATCT GCGACTCGGC CTCGGTGATG CGCGACGGCA AGGTCGTCGA GCACGGGCCA
GTGGCGGAGC TGCTGGCCAC ACCGGGTTCG GACCTGGCCG ATCAGGCGTT CCGGCTGGCC
GCACCGGGCG AGGGCGGCGG GATCAACGTC GAGGTGACGT TCACCGGTTC GGCCGTGGGC
GAGCCGGTGC TGGCCGCGTT GGTGCGGCAC TTCGATGTGG ACGCTTCCAT CACCGACGCC
TCGGTGCACA CCGTGGCGCA GGGAACCGTT GGGCGGCTGC GGTTGCGGCT GCCCCAGTCA
GCAGCCAGCG AGAAAGCCGC CGCCTGGCTT TCCGAGCAGG GATACGGGGT GCGTCGGATA
TGA
|
|---|
| Protein sequence | MISLSKVSKR FGSTRAVDDV SLDVPAATIH GVLGRSGAGK STLLRVVNLL EPPDSGTVTV
AGRDLGTLTP AGLRDARARI GMVFQHFHLL HNRTVAANVE LPLKLHRVER GERQRRVAEL
LELVGLSDQA RKFPAQLSGG QRQRVAIARA LALRPDVLLS DEATSALDPG TTVEILDLFV
KLRDTLGLTI LLITHELDVI TRICDSASVM RDGKVVEHGP VAELLATPGS DLADQAFRLA
APGEGGGINV EVTFTGSAVG EPVLAALVRH FDVDASITDA SVHTVAQGTV GRLRLRLPQS
AASEKAAAWL SEQGYGVRRI
|
|---|
| |