Gene Snas_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1704 
Symbol 
ID8882894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1796083 
End bp1796574 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCMP/dCMP deaminase zinc-binding protein 
Protein accessionYP_003510496 
Protein GI291299218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.541533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.158626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGG GAAGCCTCAC CGAAACCGAC CGCCAGCACC TGCGCCGCTG CGTCGACCTC 
GCCCGCGAGG CCCTCGACGC CGGGGACGAT CCCTTCGGCT CGCTGCTCGT CGACGGCGCC
GGTGTCGTCC GCCGCGAGGA ACGCAACCGG GAACGCAGCG TCGACGCGAC CTGCCACCCC
GAGTTCGCGC TCGCCAAATG GGCCGGGGCC AACCTGAGCC CGGACGAGCG ACGCGACAGC
GTCGTCTACA CCTCCGGCGA GCACTGTCCG ATGTGCAGCG CCGCCCACGC GTGGGTCGGA
CTGGGCCGTA TCGTCTACGT CGCCAGCTCC GCCCAGCTGA CGGCCTGGCG CCGCGAGCAG
GGGTTCGGGC CCGGTCCGGT CGCGTCGCTG TCGATCCGGG ACGTCGCCCC GGCGATACCG
GTCGCCGGAC CGGAACCGTC GCTTCAGGAG GAGATCTTCG CGTTGCACCG CCGGGCCGCC
GCCCGCGCCT GA
 
Protein sequence
MSVGSLTETD RQHLRRCVDL AREALDAGDD PFGSLLVDGA GVVRREERNR ERSVDATCHP 
EFALAKWAGA NLSPDERRDS VVYTSGEHCP MCSAAHAWVG LGRIVYVASS AQLTAWRREQ
GFGPGPVASL SIRDVAPAIP VAGPEPSLQE EIFALHRRAA ARA