Gene Snas_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1688 
Symbol 
ID8882878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1780266 
End bp1780727 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID 
Productcysteine dioxygenase type I 
Protein accessionYP_003510481 
Protein GI291299203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.287539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.148043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA ACAGCCGGGG CGACTTTCTC GACATCGCCC GCAGCTGGGC CGAGGACCCG 
AGCGCGTGGA CGGCACGACC GCGATTCGAT CCCCAGCAAC GCTGGTATCA CCGCATGCAC
GTAGGCGACG GCTACGAGGT GTGGCTGTTG ACCTGGCTGC CGGGCCAGGA AACCGAACTG
CACGACCACG GTGGCTCCGC GGGCGCCTTC ACCGTGGTGT CCGGTGAACT CACCGAGTTC
ACCCCCTCGG CAACGTCGGC GGGACTCAGC ACCTGGACGC TGCGCTCGGG CCAGGGCCAC
CGCTTCGGGG CCAGGTTCAT CCACAAGGTC ACCAACCGCG GCACCGAACC GGCGATCAGC
GTCCACGCCT ACGGACCGGC GCTGACCATC ATGCGCCGCT ACGAGCTCAC CGAGTCCGGA
CTGCGGATGG CCAACGTCGA GATGGCTGGT GCGCAGTGGT GA
 
Protein sequence
MTSNSRGDFL DIARSWAEDP SAWTARPRFD PQQRWYHRMH VGDGYEVWLL TWLPGQETEL 
HDHGGSAGAF TVVSGELTEF TPSATSAGLS TWTLRSGQGH RFGARFIHKV TNRGTEPAIS
VHAYGPALTI MRRYELTESG LRMANVEMAG AQW