Gene Snas_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1661 
Symbol 
ID8882851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1752494 
End bp1752982 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003510456 
Protein GI291299178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.228688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC TTCGCCGAGG AGCGCTCGCC AGCGATAGCC CCCGAGCCCG GCTGGCGGAG 
CTCGGGCTGT CGTTGCCCCA CGTAAGTCCG CCCAAGGGCT CCTATGTTCC GGCCGTCCGC
AGTGGAAACA TGGTGTATGT CGCCGGGCAG GTGCCGTTGA CCGACGGCAG ACTCGTCGCG
GCCGGGAAGG TCGGCGCCGA GATCAGCCCG GAACTGGCGG CGGACCTGGC CCGCCAGTGC
GGACTGGCCG CACTGGCGGC CATCGACGAG GTCGCCGACC TGGACGAGGT GGCCCGGGTG
GTCCGCGCGA TCGGCTACGT CGCCTGCGCC CCGGGCTTCA TCGACACCCC CGGCGTGGTC
GCCGGGGTCG GCGACCTGCT CGACGACCTG TTCGGGGACT CCTCGCCGTG TATGCCGGTC
GGGGTGCCGT GCCTGCCGCT GAACTCGCCG GTCGAGATCG AGCTGACCGT CGAACTCAGC
CCCAGGTGA
 
Protein sequence
MTSLRRGALA SDSPRARLAE LGLSLPHVSP PKGSYVPAVR SGNMVYVAGQ VPLTDGRLVA 
AGKVGAEISP ELAADLARQC GLAALAAIDE VADLDEVARV VRAIGYVACA PGFIDTPGVV
AGVGDLLDDL FGDSSPCMPV GVPCLPLNSP VEIELTVELS PR