| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1661 |
|---|
| Symbol | |
|---|
| ID | 8882851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1752494 |
|---|
| End bp | 1752982 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003510456 |
|---|
| Protein GI | 291299178 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.228688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAC TTCGCCGAGG AGCGCTCGCC AGCGATAGCC CCCGAGCCCG GCTGGCGGAG
CTCGGGCTGT CGTTGCCCCA CGTAAGTCCG CCCAAGGGCT CCTATGTTCC GGCCGTCCGC
AGTGGAAACA TGGTGTATGT CGCCGGGCAG GTGCCGTTGA CCGACGGCAG ACTCGTCGCG
GCCGGGAAGG TCGGCGCCGA GATCAGCCCG GAACTGGCGG CGGACCTGGC CCGCCAGTGC
GGACTGGCCG CACTGGCGGC CATCGACGAG GTCGCCGACC TGGACGAGGT GGCCCGGGTG
GTCCGCGCGA TCGGCTACGT CGCCTGCGCC CCGGGCTTCA TCGACACCCC CGGCGTGGTC
GCCGGGGTCG GCGACCTGCT CGACGACCTG TTCGGGGACT CCTCGCCGTG TATGCCGGTC
GGGGTGCCGT GCCTGCCGCT GAACTCGCCG GTCGAGATCG AGCTGACCGT CGAACTCAGC
CCCAGGTGA
|
|---|
| Protein sequence | MTSLRRGALA SDSPRARLAE LGLSLPHVSP PKGSYVPAVR SGNMVYVAGQ VPLTDGRLVA
AGKVGAEISP ELAADLARQC GLAALAAIDE VADLDEVARV VRAIGYVACA PGFIDTPGVV
AGVGDLLDDL FGDSSPCMPV GVPCLPLNSP VEIELTVELS PR
|
|---|
| |