Gene Snas_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1613 
Symbol 
ID8882802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1701928 
End bp1702941 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510409 
Protein GI291299131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0233991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTGG ACGCGTACAT CGCCGAGCAC GACGGAGAGT GGCGGCGGCT GGAGCAGCTG 
TCGCGGACCG GGCGGCTGCG GCCCGAGCAC GTCGACGAGA TGCTGATGTT GTATCAGCGT
GCGTCGACGC AGCTGTCCAT GGTGCGCAGC CGGATCCCGG ACGCGCTGTT GGTGGCGCGG
CTGTCGCGGC TGGTTCTCAT GGCGCGCAGC GCCATCACCG GCAGCCGGGC GATGGGGTGG
CGGATGTTCC TGCGGTTCTT CACGCACCTG TTCCCGGCCG CCTGTTATCG GGCCCGGCAC
TGGTGGGCGG TGGCGGGGGT GCTGTTCCTG GCGATCATGG GCGGGATCAT CACCTATGTG
GCCTCCCATC CCGAGGTGCA GACGCAGGTG TACCCGCAGC CGGTCATCGA CGATCTGGTG
AACAACAGTT TCGAGAACTA CTACTCGGAG TACCAGAACC AGAACTTCGC GCTGAAGGTG
TGGACGAACA ACGCCCGGCT GGCCGGGATG GCGCTGGTGG GCGGTGCGCT GATCATCCCG
CCGCTGTGGG TGTTCTGGCA GAACGCTCTC AACGTGGGGC TGACCGGCGG GATCATGGTC
GGCAACGACC GGGGGGACCT GTTCTTCGGT CTGATCATGC CGCACGGGTT GCTGGAGATG
TCGGCGTTCC TGTTGGCCTG CGCGGTGGGC CTGCGGATCG GTTGGTCGTG GATCAATCCC
GGCGCGGGCA AGACCCGGGG GCAGTCGCTG GCCGAGGCGG GGCGCTCGGG GATCGTGGTG
GCGCTGGGCC TGGTGGCGGT GCTGGCGGTC GCGGGGTTGA TCGAGGGATT CGTGACGCCG
AACCTGCCCG CCTTCGCCGC GATCCCGATC GGGGTGCTGG CGTTCGGGAG TTTCGTGGCC
TATGTGGTGT TCGTGGGCCG CCGGGCGACG GCCGAGGGTT ATACCGGGGA TCTGGAAGCG
GACCTGCGCG AGGCGTACGC CCACGCGCAG GGTCCGGTGC CGTTGACGCG CTAG
 
Protein sequence
MDLDAYIAEH DGEWRRLEQL SRTGRLRPEH VDEMLMLYQR ASTQLSMVRS RIPDALLVAR 
LSRLVLMARS AITGSRAMGW RMFLRFFTHL FPAACYRARH WWAVAGVLFL AIMGGIITYV
ASHPEVQTQV YPQPVIDDLV NNSFENYYSE YQNQNFALKV WTNNARLAGM ALVGGALIIP
PLWVFWQNAL NVGLTGGIMV GNDRGDLFFG LIMPHGLLEM SAFLLACAVG LRIGWSWINP
GAGKTRGQSL AEAGRSGIVV ALGLVAVLAV AGLIEGFVTP NLPAFAAIPI GVLAFGSFVA
YVVFVGRRAT AEGYTGDLEA DLREAYAHAQ GPVPLTR