Gene Snas_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1595 
Symbol 
ID8882784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1675315 
End bp1678644 
Gene Length3330 bp 
Protein Length1109 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510391 
Protein GI291299113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GCAACCGCGA CCGCATAGGC CAGATGTTCG ACCTCCTAGC CCCCCAACTA 
GACGGCTTCC TCTCCCGAAT CCTCAACCGC CAACTCGGCG CCGGGCGCAC CTGGGTCGAC
ATCGTCACCG CCGCCGAAGC TAACAACGGC CGCGAAGTGC ACCACGGCGA CATCTCAATC
CAGCTAAAGC TCATCACCCA GAACTACACC AACCGCTTCC GATCTGGCTG GAATCCCCTT
CGCTCGCATC TCAACCGCAC CCACGAGGCC TACGCCTCCG AGCTCCTGCA AGTCCGTCAC
ACCTGGGCCC ACGGTAAAGC TTTCACCGAC GACGACGCCT ACCGAGCCCT CGACACCGCC
CAGCGCCTCG CCACCGCAAT CGGAGCCGCC GGTACCAGCG ACGACATCGC CCAGATCCGA
CTCAACCTTC GCCGCGTCAC GGCCGACAAA GACGACAAGA AAGCTCTCAA AGCCGCAGTC
GACAATCCCG AAGCCTCTGG CTTGAAACCC TGGCGCGAAG TACTTCCGCC CCACGATGAC
GTAGCGACCG GCAACTTCCA CGCATCCGAA TTCGCCGCCG ACCTCTACAA AGTCTCCACC
GGCGGTGAGT TGGACACCGA CTACTCTGAC CCCGTCGAAT TCTTCAATCG CACTTACCTC
ACCGAAGGTC TGCGTGACCT CATCACCCGA GCCGTACGCC GCCTCTCCGG TGACGACAAC
GCTTCCCCGG TCATCAATCT CCAAACGAAC TTTGGAGGCG GAAAAACACA CTCGATGCTG
TCCCTATGGC ACATCGCCGC CGGACTCCCC ATCGGCGAAT TCTCCCAGGA CACCCAAGAA
CTGCTAACCG CAAGTGGCTA CAACGGCGAG AAGATCAACC GAGTCGCGAT CGTCGGCAAC
CACCTCAGCC CCACAGGATC CACAAAAAAC GACGGCATGC AGGTCAACAC GATCTGGGGC
GAACTCGCAT GGCAACTTGG CGGCGCCGAA GCCTTCGAAC TCGTCGCCGC CGCCGACAGA
GATCGCACGC ATCCCGGAGA CGCCCTGCAC GACCTACTGG CCCTGTACTC CCCAGCCGTG
ATCCTGATCG ACGAATGGGT TGCCTACGCT CGGTCCTTGG TTGGCCGCGA CGACCTCGCC
GGCGGCACCT TCGACGACCA GTTCACATTT GCTCAGTCTC TCACCGAGAC CGCAAAGGGC
ACCTCCGGAA TCCTGCTAGC CATCTCCATC CCCGCATCCG AGCGCGGTGA GAACGCCGAA
CCCGTCGCAG GCACCGCCGA AGAGGTCGGC GGAACCAACG GGCTTGAGGC TCTGGAACGA
CTTCAGAACG TCGTGCGGCG AGTAGCTGAC CAGTGGCGTC CCGCCTCATC TGACGAGGCT
TACCACATCG TGAAGCAGCG GCTGTTCAAA CAGGTCGACG CCGCCGCGCT CGCCGCGATC
AGCGCCACTG CTCGCGCCTA TGTGGACATG TATCGCAAGT ACACCGATGA CTTCCCTCGC
GAAGCAAGAA ACTCTGCGTA CGAGAATCGA ATCAAGCGAA CGTACCCGAT CCACCCAGAA
CTGTTCGACA CTCTCTACGA AGAGTGGTCG TCACTGGAAC GCTTCCAGCG CACCCGTGGC
GTGCTCCGTC TGATGAGTAT GGTTATCCAC GCATTGTGGA CTGGCGAGGA TGCCGCGCCG
CTGATCATGC CGTCGTCGAT CCCGCTGGCA GCAGGGAAGG TGAACTCTGA ACTAACTCAG
TACCTTCAAG ATTCCTGGAA AGCGATCATC GATGCCGATG TGGATGGGCC AAACTCAGAA
CCCGCCAGGA TCGATGCGGA GAAACCGCTC TACGGCCAAC GGTCGCTGAC CAAGCGCCTC
GCGCGGACGG TGTTCTTCGG CGCAGCACCG ACCATCGCGC CCAAATCGAT TCATAAGGGT
GTCAGCGCCA AGCGAGTCTT CCTAGGCACC GCCGTTCCTG GTGATGTCCC AGGGAACTTC
CACTCCGCGC TAACACGGCT CTGTGACCGG GCGACGTACT TCTATTCCGG TTCCGGAAAG
TACTGGTACG ACCTCCAACC CAACATCACG CGTACCGCGA AGGACCAAGC CGAGAGGTTG
CACAAAGAGG ATGTGTGGGC CGACATCGTC CGTCGACTCA AACATCAGAC CAACACGCGC
GGCGACTTCA CCGGACTGCA CATCTGCCCC GAAACCAACG CCGACATCCC TGACACCGAC
GAAGCCCGTT TGGCAATCCT TCACCCCAAG GTCGCGCACA AGCGCGCTAT CGAGTCGGTG
GCGAAGGATT TCGCCAAGAG GGCCACCGAA CAGCGGGGAA GCGCCAACCG CACTCACCGC
AACATGCTCG TCTACCTCGC GGCCGATGAA GACCGGTTGG AAGAGCTTGA GGCAGCTATT
CGCGACTACC TAGGCTGGAA ACATGTCCTC GACAACGAGG TGGATCTCGA TCTGACCCAG
AATCAGAAGA AGCAGGCAGA GCAGCGCCAG GAACAGGCCG ATCAAACGGT GACTACGCGC
CTGCTGCAAA CCTTCGTCTG GGCGCTCATC CCCGCGCAGC CCGATCCGAG CGCGCCGTTC
GTCGTGCGGG AAATCAAGGT TGAAGGACAG TCCGATGCGC TCGCAGAGCG GGTTTCGCGA
CGCCTCAGCA ACGATGGTGA CCTGTCCACT CGTCAAGCGG CCGCGACGAT CCGACTGGCT
ATCAACAAAG TGCCGCAGAT CTGGAACGAC GGTCACGTCT CCCTTGGAAC TCTGTGGGGC
CTCTGCAGCC AATATCCCTA CATGCCGCGC CTGCGTGACC GCCGTGTCCT CAATGAGGGC
ATAGTCGACA TTCCGTTGAT CTGGCAGACC GACGCTTTCG CGCTCGCAGA AGGCTACGAG
GAATCAGACG GCCACTACGT CAACCTTTGG ATCCCGGACG ACAACCGGCC ACCTCCACCG
GCTACCGATT CTCTCCTGGT CGTCCGCCCT GATGTTGCCA CCGCACAGAG GAACACCGAA
GAAGCCACTG CGGAACCAAT CGTTGGACCC ATCGGACTGG ACACTGAGAA CCCCATCAAG
CCAGATCCCC AACACCCCAG CCCTCAGCAC CTCCACGTCA AGACTCGCTT CTTCGGTGTC
AAGACCCTCA ACAGCGAAAA AATGGCGCTG GGATTCAAGA ACATCGCTGA GGAAGTCATC
GCTCATCTGC GCGCGGACAC GAGCACCGTC ACCGTGCGGA TCGAGATTGA AGCGACTGAC
GAGTCCGGCT TTGACGAGAA CCGTGTGCGT ACGGTCTCCG AGAACGCACG CACCCTCAAG
TTCGACCAGT CCGGCTTCGA GGAAAGCTGA
 
Protein sequence
MATSNRDRIG QMFDLLAPQL DGFLSRILNR QLGAGRTWVD IVTAAEANNG REVHHGDISI 
QLKLITQNYT NRFRSGWNPL RSHLNRTHEA YASELLQVRH TWAHGKAFTD DDAYRALDTA
QRLATAIGAA GTSDDIAQIR LNLRRVTADK DDKKALKAAV DNPEASGLKP WREVLPPHDD
VATGNFHASE FAADLYKVST GGELDTDYSD PVEFFNRTYL TEGLRDLITR AVRRLSGDDN
ASPVINLQTN FGGGKTHSML SLWHIAAGLP IGEFSQDTQE LLTASGYNGE KINRVAIVGN
HLSPTGSTKN DGMQVNTIWG ELAWQLGGAE AFELVAAADR DRTHPGDALH DLLALYSPAV
ILIDEWVAYA RSLVGRDDLA GGTFDDQFTF AQSLTETAKG TSGILLAISI PASERGENAE
PVAGTAEEVG GTNGLEALER LQNVVRRVAD QWRPASSDEA YHIVKQRLFK QVDAAALAAI
SATARAYVDM YRKYTDDFPR EARNSAYENR IKRTYPIHPE LFDTLYEEWS SLERFQRTRG
VLRLMSMVIH ALWTGEDAAP LIMPSSIPLA AGKVNSELTQ YLQDSWKAII DADVDGPNSE
PARIDAEKPL YGQRSLTKRL ARTVFFGAAP TIAPKSIHKG VSAKRVFLGT AVPGDVPGNF
HSALTRLCDR ATYFYSGSGK YWYDLQPNIT RTAKDQAERL HKEDVWADIV RRLKHQTNTR
GDFTGLHICP ETNADIPDTD EARLAILHPK VAHKRAIESV AKDFAKRATE QRGSANRTHR
NMLVYLAADE DRLEELEAAI RDYLGWKHVL DNEVDLDLTQ NQKKQAEQRQ EQADQTVTTR
LLQTFVWALI PAQPDPSAPF VVREIKVEGQ SDALAERVSR RLSNDGDLST RQAAATIRLA
INKVPQIWND GHVSLGTLWG LCSQYPYMPR LRDRRVLNEG IVDIPLIWQT DAFALAEGYE
ESDGHYVNLW IPDDNRPPPP ATDSLLVVRP DVATAQRNTE EATAEPIVGP IGLDTENPIK
PDPQHPSPQH LHVKTRFFGV KTLNSEKMAL GFKNIAEEVI AHLRADTSTV TVRIEIEATD
ESGFDENRVR TVSENARTLK FDQSGFEES