Gene Snas_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1590 
Symbol 
ID8882779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1668250 
End bp1669539 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510386 
Protein GI291299108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.382226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC GGCAGTGGCG ACCCACCGGC GCGCTGCGCC GGTCGGTGAC GATCGTGGCC 
GTCGCGTTGC TGGCGGCGGT GGGAATGGGC CGGGTCGACC TGGTCGTCCT GGCGACACCG
CTGGCCCTGG GGGTGCTGGC CAGCATCTGG GTGCGTCCCC GGGTCGCGCC GAGCGCCGAG
ATCGTCGTGG CCGAGGACCG GGTGCCCGAG ACCGACGAGT TCAACGCCTG GGTGCGGGTG
GCCAACCCCG ACCCGGTGCC GACGGTCAGC GTCGTGGCCA CCCGGGAACC GGCCTGGCTG
CGACTGCGGC ACGGCGTGGG CTTCTACGTC CGCGCCGTGG CGGCGAACGG CGAGGCCACG
GTGTCGCTGC GGGGCGTGGC CCGGCGCTGG GGCAGGCACG AGATCGGGCC CGCCCTGGTG
CGGTCCTACG CGTGCGACGG CCTGCTGCGC ACCGCCGACC TGATGCTCCC GGCCCGGGGA
ATCCGGGTCT ACCCCACCGC CGACGTGTTC GACTCCCGGC AGGAGCTGCC CCGCGCGGCC
GGGATGACCG GCATCCACCG CACCCGCCGT CACGGCGACG GGGGAGAACT GGCCGAGGTG
CGGCCGTTCC AGCCCGGCGA CCGGCTGCGC CGCATCGACT GGCGGGTCAG CCTGCGCCGC
CGCGAACCCT ACGTCAACTC GACACTGTCC GAACGCGACG CCGAGGTGGT GATCGTGATC
GACGTGCTTC ATGAGGCCGG AAACCCCGGC GAGACAAGCA TTCTGGACGT CACGGTGCGC
GCCGCGGCGG CCATCGCCGA GCACTACACC CGACAGGGCG ACCGGGTGTC GGTCGTCGAG
TTCGGCTCCG GACTGCGGCG GCTGCGACCC GGCACTGGCA GACGGCAGTT CCGCGCCGTC
CTGGAGTGGC TGACCGACAC CCGCGTGACC CTGGGGCCGT ACGCGGGCGC GGAGCGGCTG
GCGTCCGGCG GCTACCTGCC GTTCGGTTCG GTCGTGATCA TGCTGACCCC GCTCATCGAC
GAACAGTCCA CCGAACTGCT GGCCCGGCTG ACCCGCTCCG GCCGCACACT GGTGACAGTG
GACACACTGC CCGACGCGCT GCGGCCGCCG CACCGCAGCC CCTGGTCGGG CATCGCGGCC
CGGCTGTGGC GCCAGGAACG CCGCAACACC GTCGACCGGC TGCGCGAACT GGGCGTCCCG
GTGGAGCGGT GGCGCGGGCC CGGCAGCCTC GACCTGATGC TCGGCGACAT CGCCAGGCTC
GGCCGCGCCC CCAAGGTGAC GCGGCGATGA
 
Protein sequence
MAARQWRPTG ALRRSVTIVA VALLAAVGMG RVDLVVLATP LALGVLASIW VRPRVAPSAE 
IVVAEDRVPE TDEFNAWVRV ANPDPVPTVS VVATREPAWL RLRHGVGFYV RAVAANGEAT
VSLRGVARRW GRHEIGPALV RSYACDGLLR TADLMLPARG IRVYPTADVF DSRQELPRAA
GMTGIHRTRR HGDGGELAEV RPFQPGDRLR RIDWRVSLRR REPYVNSTLS ERDAEVVIVI
DVLHEAGNPG ETSILDVTVR AAAAIAEHYT RQGDRVSVVE FGSGLRRLRP GTGRRQFRAV
LEWLTDTRVT LGPYAGAERL ASGGYLPFGS VVIMLTPLID EQSTELLARL TRSGRTLVTV
DTLPDALRPP HRSPWSGIAA RLWRQERRNT VDRLRELGVP VERWRGPGSL DLMLGDIARL
GRAPKVTRR