Gene Snas_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1581 
Symbol 
ID8882770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1657568 
End bp1658356 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID 
ProductIon transport 2 domain-containing protein 
Protein accessionYP_003510377 
Protein GI291299099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGA AGAATTCGAC GGCTCGGGAC GAGCGACTGC CACGGGTCAG CGCGTGGGAG 
CGCGTCAGCG ATCTCCCGCT GACGATTCTG GCAATCGTGT TCCTGCTGGC CTACGCGATC
CCGATCATCT TCCCGGACAT CCCGCGGCGA TGGCACACCA TCCTGGACTA TGTGGATCTC
GCCGTCTGGG CACTGTTCAC CGTCGACTAT GTCCGCAGGC TGGTCATCGC CGAGGAGAAG
TGGTACTTCG TGCGGACCCA CCTGCTGGAC CTGGCGGTGG TGGTGTTGCC GCCGCTGCGT
CCACTGCGGC TGGTCAGGTC GGCAGCACTG CTGTTCAGTG TGGTGGATCG CCGGACGCGG
GCGCATCCCC GGCGCAAGAT GGCCATTCTG GTGGGTACCA CGGCGGTGAT CCTGCTGTTC
CTGTCCGCGC TGGCGGCCCT GGACGCCGAG CGCGGCAACC CCGACGCGCA GATCCAGTCC
TTCGGGGACG CACTGTGGTG GGCGATCGTG ACGGTGTCGA CCGTCGGCTA TGGCGACTAC
TTTCCGGTCA CCGTGGAGGG TCGGCTGGTC GCGATGACGC TGATGTTCGG CGGCGTGGGG
CTGATCGGGT TCATCACGGC GTCGGTCACC AGCTGGGTGG TGGAGAAACT GTCCAAAGCC
GACAAGGTCG CCGACGACAC CCATGACAAT GTGGATCTGC TGCTGCGGGA GGTGCGCCAG
CTGCGCGACG AGGTGGCCGA GCTGCGGGCC GAGGTGGGGC GGCGAATGCC GCCCGCGTCA
CCCGGGTAG
 
Protein sequence
MFTKNSTARD ERLPRVSAWE RVSDLPLTIL AIVFLLAYAI PIIFPDIPRR WHTILDYVDL 
AVWALFTVDY VRRLVIAEEK WYFVRTHLLD LAVVVLPPLR PLRLVRSAAL LFSVVDRRTR
AHPRRKMAIL VGTTAVILLF LSALAALDAE RGNPDAQIQS FGDALWWAIV TVSTVGYGDY
FPVTVEGRLV AMTLMFGGVG LIGFITASVT SWVVEKLSKA DKVADDTHDN VDLLLREVRQ
LRDEVAELRA EVGRRMPPAS PG