Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1516 |
Symbol | |
ID | 8882704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1602779 |
End bp | 1603468 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003510313 |
Protein GI | 291299035 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.208877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGGCG TGGACGCTAG CGAACAGCCC CAACGAATGC CGCATGGATA CTGCAACGAC ACCGTTCACC ACGACGACGC GGTGATCAAA CGGTTCACCG GCCCCGACGC CGCCGCCCGA GCATCCACTG AGGTCCGTGC CCTGCGGGCG GCGTTTCCGA CCGTGCCGGT GCCGCAGGTC AAGGCGGCCT CGGACGCCGA GATCACCTGC GAGTTCGTGC CCGGGGTCCA CGGCCAGGAC CTCATCGGGC CCGACACCGC CGCGCGGCTG CTGGCCGAGT GCGGCCGGGT GCTGGCCACG ATCCACGCCG TCCCGGTCGC GGCGGTGCAG GCCGAACCGC ACCCGGCGGG TGTCCTGATC CACGGCGACT TCGGGCCGCA GAACATGCTG TTCGACAAGG AGACGCTGAC GGTGGCGGCC GTCCTGGACT GGGAGTGGGC CCATATCGGG CAGCCCCTTG AGGACCTGGC GTGGTGCGAG TGGATCGTGC GCAGCCATCA CGCCGACTGT GTGGACGCGT TGCCGCACCT GTACCACGGT TACGGTGCGC CGATGCCGCC GTGGCCGCGC CGTCAGGCCG CGATGCTGGG CAAATGCCGT GCCATGCGGC AGTTCGGGGC GCGGCGGCAG GACGGTTCGG CGACGGTGTG GCAGCGACGC ACCGCGATCA CGCAGGCGTG GCGGGAATAA
|
Protein sequence | MYGVDASEQP QRMPHGYCND TVHHDDAVIK RFTGPDAAAR ASTEVRALRA AFPTVPVPQV KAASDAEITC EFVPGVHGQD LIGPDTAARL LAECGRVLAT IHAVPVAAVQ AEPHPAGVLI HGDFGPQNML FDKETLTVAA VLDWEWAHIG QPLEDLAWCE WIVRSHHADC VDALPHLYHG YGAPMPPWPR RQAAMLGKCR AMRQFGARRQ DGSATVWQRR TAITQAWRE
|
| |