Gene Snas_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1500 
Symbol 
ID8882688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1582759 
End bp1584153 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content73% 
IMG OID 
ProductAmidase 
Protein accessionYP_003510297 
Protein GI291299019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.902892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGC CACGGGCTAC GGCTCGGCAG ATAGCGCACG CGGTGAGACG GGGGGACGCG 
ACGGCGGCGA CTGTTGTGGC CGAGCACATC GCTGAGGGGG AGGCCAGGGC CGCCATCTCT
GGGGCGTTCA CCGCGGCGAG GGGGCGCAGT GCGCTCGCCG AGGCCAAGAC GGTGGACGAG
TTGCCGGACT TGGCGAGTTT GTCGTTGGCC GGGGTGCCGG TGGCGGTTTG TGAGCGGTTT
TCGGTCGCCG GGCAGCACAC TCGGCATGGG TCGAACGCCG CTGTGCTGCC CGTGGCGTCG
AGGGACCATG AGGTGGTGCG GCGGTTGCGG GGCGCCGGGG CCGTGGTGAT CGGGTCGACG
CGCTCGAGTG AGTTGGGGTT GTGGGCTTCC ACCGATGACG GGCAGGGGCC GTTGGCGAAT
CCGTGGCGGG CCGATCGGGG GGTGGCCGGG CCTTCGGGTG GGGCCGCTGT GGTGGTCGCC
GATGGGACGG TGCCGTTGGC CGTGGGTAGT GACGGGCCGG GGACTGCCGG GGGTGTGCGG
ACCACCGCGG CGGCCTGTGG GCTGATCGGG GTGAGTGCCG AGCATGATCC CGCCGAGTAC
CGGGAGAACA CCGCGGGGTG GCTGTCGGGG GCGGCGGGGG TGCTGGCCAC GACCGTGGGG
GACGCGGCGG AGGCGCACGC GGTGTTGACG CGGACCCGGC CGTCGGTGAT CAGTGAGCCG
CACCGGTTGC GGATCGCGGC CACCGATCGG CCGCCCATCG GTGGGGTGGG GCAGATGCGG
GGGCCGATCA ATCCGGACGC CGAGACGGTG GAGTCGCTGT TGGAGGTCGT GCGGACGTTG
ACCGATCTGG GGCACGACAC CCGCAGGTTC GCCCCGAACC TGGGGACGCG GGCTTCGGGG
GCCTCGTTCA CGGCGTGGGC CGCGGCGGCG GGGCAGCGGG CGGCGCGGTT CGAGCGGGCC
CGGTTGCAGC GGCGGACCCG GCGGCTGGCC GCCGTGGGGG ATCGGACGCT GCGGGGTGGG
TTGTCGGTGC TGTTCGGGGA CGGGGCCCGG ACGCGGGCGC ACGTCGTGGA GTGGTTCACC
GACCATGGGA TCGACGTGCT GGTGACCCCG GCGTTGGCAG CCCCGGCGGC GCCGGGGGAG
AACTGGTCGC GGATGGGCCT GCGGGAGAAC CTGCGCGCCA GTGCCCGGGC GGCCGCGTTC
ACCGCCGTGT GGGGGCTGAT CGGGTTGCCC GCGTTGGTGT TGCCCGTCGG GACGCGTGCC
GACGGGCTGC CGTCGACTAT TCAGTTGATC GCGCCGCCCG GTGGTGGGGC GGTCCTGTTC
GACCTGGCAT CGCAGCTGGT CGATGTGTGT AAGCCCCGTC GCTATCCCCC GGCGGTTATT
GCGGACGGGG CCTGA
 
Protein sequence
MSWPRATARQ IAHAVRRGDA TAATVVAEHI AEGEARAAIS GAFTAARGRS ALAEAKTVDE 
LPDLASLSLA GVPVAVCERF SVAGQHTRHG SNAAVLPVAS RDHEVVRRLR GAGAVVIGST
RSSELGLWAS TDDGQGPLAN PWRADRGVAG PSGGAAVVVA DGTVPLAVGS DGPGTAGGVR
TTAAACGLIG VSAEHDPAEY RENTAGWLSG AAGVLATTVG DAAEAHAVLT RTRPSVISEP
HRLRIAATDR PPIGGVGQMR GPINPDAETV ESLLEVVRTL TDLGHDTRRF APNLGTRASG
ASFTAWAAAA GQRAARFERA RLQRRTRRLA AVGDRTLRGG LSVLFGDGAR TRAHVVEWFT
DHGIDVLVTP ALAAPAAPGE NWSRMGLREN LRASARAAAF TAVWGLIGLP ALVLPVGTRA
DGLPSTIQLI APPGGGAVLF DLASQLVDVC KPRRYPPAVI ADGA