Gene Snas_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1437 
Symbol 
ID8882624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1522053 
End bp1524617 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content71% 
IMG OID 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003510236 
Protein GI291298958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.429266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.268919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG GGCACCTTCG CATCTATCTC GGGGCCGCCC CCGGTGTGGG CAAGACCTAC 
GCGGCACTGG AGGAGGCGCG GCGCCGGGTC GCGCGCGGCA CCGACGTCGT CGTCGGTTTC
GTGGAGACCC ACGGCCGCCG CTCCACCGCG GCGCTGCTGG ACGGCCTGGA GGTCCTCCCC
CGCCACTCGG TGGGCTACCG GGGCACCGCG TTCGAGGAGT TCGACGTGGA CGCGGTGCTG
CGGCGGCGTC CCGAGGTGGC GGTGGTGGAC GAACTGGCGC ACACCAACGT TCCCGGTTCC
CGCAACCAGA AACGCTGGCA GGACATCGAC GAACTGCTCG ACGCCGGGAT CAACGTCATC
TCCACCGTCA ACATCCAGCA CCTGGAGTCG CTCAACGACG TGGTCACGAA GATCACCGGG
GTGCCGCAGC AGGAGACCGT GCCCGACGAG GTGGTGCGCC GCGCCGAACA GGTGGAGCTG
GCCGACCTGA CGCCGGAGGC GCTGCGGCGG CGGATGACCC ATGGCAACGT CTACCCGCCG
GAGAAGATCG ACGCGGCGTT GTCGAACTAC TTCCGGGTCG GCAACCTGAC CGCGCTGCGG
GAGCTGGCGC TGCTGTGGCT GGCCGACAAG GTCGAGGACC AGTTGTCGAA GTACCGCAGC
GACAAGGACA TCAAGGACAC CTGGGAGTCC AAGGAGCGGG TGGTGGTGGC GCTGTCGGGT
GACGCCGAGG GCGACACGCT GATCCGCCGC GCCAAACGCA TCGCGGCGCG CAGTGGCGGC
GCCGACCTGC GCGCGGTGTA CGTCGCCAGC GGCGACGGGC TGGCCGGGGC CCGCAACGCG
AAGAACCTGG CCCGGCAGCG GCTGCTGGTG GAGAGCATGG GCGGCACCTT CCACCAGGTC
ATCGGGGACG ACATCCCGAC GGCGCTGTTG GACTTCGCGC GCGGCGTCAA CGCCACCCAG
CTGGTGCTGG GCGCCTCCCG CCGGGGCCGG TTCGCGCAGA TCCTGTCGAC CGGCGTCGGG
GTCACCACGA CCGCGAAGTC GGGTTCCATC GACGTCCACC TCGTCACCCA CGACCGGGTC
GCCAAGGTGA AACGGCCGAC GTCCCCGGCG CCGTTGAGCC GCCAGCGGCG GATCACCGGT
TTCACCGCCA CGATCCTCGG GCTTCCGGCG CTGGTCGCGG CCCTGCTGCC GTTGCGCGAC
GACCTCAACG CCACCAGCAT CATGCTGATC ATGCTGACCG CGGTCATGGG CATCGCGCTG
ACCGGCGGCA TGTGGCCCGC CGTGCTGGCG GCGGTCGGCG GTTTCCTGCT GGTCAACTTC
TTCTTCCTGC CGCCGCTGTA CACCTTCGCC ATCGGCGACC AGGAACACCT GCTCGCGTTG
TGCGTCTTCG TGTTCGTCGG TTTCGTCGGC GCGACGGTCG TCAACATCCT GGCCGCCCGC
ACCCGGCAGG CGGGCCGCGC CAGCGCCGAG GCCCAGACAC TGTCCATACT GGCCGGAAGC
GTGCTGCGGG GCGAGGACGC GCTGCCCGCC CTGATGAACC AGATGCTCGA CACCTTCGGC
CTGACCTCGG TGACGCTGCT GGAGCGACGC CGCGACGGCG TCGGCCCCGA CGAGCGCCAC
GACCCGGCCG ACTGGACGAT GGTGGCCTGC GCGGGCACCC CGTGCGCCAG TCCCGGCGAG
GCCGAGACCG ACATCCCCAT CGACGACAAA CTGTCGCTGG CCCTCAAGGG CCGCACCCTG
GACGCCGCCG ACCGCCGCAT CGTGGAGGCG TTCGCGATGC AGGCCGCCGT GGCGCTCAAG
CAGGAACGGC TGGCCGCCGA GGCGGCCACC GCCCGGCCGC TGGCCGCCGC CGACAAGATG
CGCACCGCGC TGTTGGCGGC GGTGTCGCAC GACCTGCGCA CCCCGCTGGC CTCGGCGAAG
GCGGCGGTGG CGGGCCTGCG CGGCAACGGC GACATGTTCT CCGCCGCCGA CCGCGACGAG
CTGCTGCTCA CCGCCGACGA ATCGCTGGAC CGGCTCGACC GGCTGGTGTC GAACCTGCTG
GACATGAGCC GGTTGCAGGC CGGGGCGCTG GGAGCGCACA CCATCCCCAT CGGACTGGAG
GAGGTGGTGC CCACGGCGCT CGACGAACTG GGCGAGGCCG GACGCGAGGT GCGGCTCGAC
GTCGCCGGTG ACCTGCCCGA GGTCGCCGCC GACCCGGGGC TGCTGGAGCG GATCATCGTC
AACGTCGTCG GCAACGCGTT GCGGCACAGC CCGCCCGGCA CCCCGCCGCT GGTCAAGGCG
GGAGCCCACG ACGACATCGT GGAACTGCGC GTCATCGACC ACGGTCCCGG AGTGCCCGAT
GTGGACCAAG AACAGCTGTT CACCCCGTTC CAGCGGCTGG GCGACCGCGA CAACGCCAGC
GGCGTCGGCC TCGGGCTGGC GCTGTCGCGG GGGCTGGCCG AGGCGATGTC GGGCACGCTG
ACGGCCGAGA ACACCCCCGG CGGCGGCCTG ACGATGGTCC TGAGCCTGCC ACAGGCGGGC
GTCAACATCG ACATGGAATC CAACCCCCGG CAGGAGGAGT CATGA
 
Protein sequence
MKRGHLRIYL GAAPGVGKTY AALEEARRRV ARGTDVVVGF VETHGRRSTA ALLDGLEVLP 
RHSVGYRGTA FEEFDVDAVL RRRPEVAVVD ELAHTNVPGS RNQKRWQDID ELLDAGINVI
STVNIQHLES LNDVVTKITG VPQQETVPDE VVRRAEQVEL ADLTPEALRR RMTHGNVYPP
EKIDAALSNY FRVGNLTALR ELALLWLADK VEDQLSKYRS DKDIKDTWES KERVVVALSG
DAEGDTLIRR AKRIAARSGG ADLRAVYVAS GDGLAGARNA KNLARQRLLV ESMGGTFHQV
IGDDIPTALL DFARGVNATQ LVLGASRRGR FAQILSTGVG VTTTAKSGSI DVHLVTHDRV
AKVKRPTSPA PLSRQRRITG FTATILGLPA LVAALLPLRD DLNATSIMLI MLTAVMGIAL
TGGMWPAVLA AVGGFLLVNF FFLPPLYTFA IGDQEHLLAL CVFVFVGFVG ATVVNILAAR
TRQAGRASAE AQTLSILAGS VLRGEDALPA LMNQMLDTFG LTSVTLLERR RDGVGPDERH
DPADWTMVAC AGTPCASPGE AETDIPIDDK LSLALKGRTL DAADRRIVEA FAMQAAVALK
QERLAAEAAT ARPLAAADKM RTALLAAVSH DLRTPLASAK AAVAGLRGNG DMFSAADRDE
LLLTADESLD RLDRLVSNLL DMSRLQAGAL GAHTIPIGLE EVVPTALDEL GEAGREVRLD
VAGDLPEVAA DPGLLERIIV NVVGNALRHS PPGTPPLVKA GAHDDIVELR VIDHGPGVPD
VDQEQLFTPF QRLGDRDNAS GVGLGLALSR GLAEAMSGTL TAENTPGGGL TMVLSLPQAG
VNIDMESNPR QEES