Gene Snas_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1338 
Symbol 
ID8882525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1416886 
End bp1418472 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content69% 
IMG OID 
Productpeptide chain release factor 3 
Protein accessionYP_003510139 
Protein GI291298861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.476931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG TAAAGGCCGA GGCGGCGCGA CGGCGCACCT TCGCGGTGAT CAGCCACCCC 
GACGCGGGTA AGTCGACGAT CACCGAGGCG CTGGCCCTGC ACGCGCAGGT CATCGGTGAG
GCCGGGGCCG TGCACGGCAA GGGCGGCCGC AAGGGCGTCG TGTCCGACTG GATGGCGATG
GAACAGCAGC GCGGCATCTC CATCACCTCG GCGGTGCTGC AGTTCTCCTA TCGCGACAGT
GTCGTCAACC TGCTCGACAC CCCAGGGCAC GCCGACTTCT CCGAGGACAC CTACCGGGTC
CTGACCGCCG TGGACTGCGC GGTGATGCTG CTGGACGCCG CCAAGGGCCT GGAACCGCAG
ACGCTGAAGC TGTTCGAGGT GTGCCGCCAC CGCCGGATCC CGGTGGTCAC GTTCATCAAC
AAGTGGGACC GCCCCGGCAT GGAGGCGCTG GAGTTGATGG ACGAGATCGA GTCGCGCATC
GACATCAAAC CCACACCGTT GACCTGGCCG GTGGGTATCG CCGGGGACAT GCACGGTGTC
ATCGACCGCC GCGACGGTTC GATGATCCAC TTCGAACGCG CGCCCGGCGG GGCGCGGGCC
GCGACCGAGG AACTGGTGGA CGCCGAGGAG GCCAAAGCCC GTTACGGCGA GGACTACACC
CAGGCGCTGG AGGAGATCGA GCTGCTGGAG GCCTCCGACG CCACCCACGA TCAGAAGCTG
TTCCTCAACG CGGTGACCAC GCCGGTCCTC TTCGGAGCCG CGGTGGCCAA CATCGGGGTG
CGGCAGCTGT TGGACGTCCT CATCGATCAC GCCCCGGCGC CGGAGCCGCG GCCCGACACC
TCCGGCAACC CCCGGCCGGT GGAGGCGCCG TTCTCGGGCT TCGTGTTCAA GATCCAGGCC
AACATGAACC CGGCGCACCG CGACCAGGTC GCGTTCGTGC GGGTGTGCTC GGGCCGGTTC
GAGCGCGGCA TGGTGGTCAC GCACGAACCC TCCGGGCGAC CGTTCACGAC GAAGTACGCG
CAGTCGATGT TCGGTTCGGC GCGCGACACC ATCGACGAGG CCTTCCCCGG CGACGTCATC
GGCTTGGTCA ACGCCACCAA CCTCGGCATG GGCGATTCGC TGTTCGTGGA CAAGAAGGTG
GAGTTCCCGG CGCTGCCGTC CTACGCGCCC GAGCACTTCG CGCAGGTGCG CTGTGACGAC
ACCTCCAAGG CCAAACGGTT TAGGCGCGGG ATCGCGCAGC TGGACGCCGA GGGTGTGGTG
CAGGTGCTGT ACTCCGACGC GCGCGGCGAC GCGGCGCCGG TGCTGGCCGC GGTGGGGCCG
ATGCAGTTCG AGGTGGCCAG CGCCCGGCTG TCGGGCGAGT TCAACGTTCC GGTCTCCGTG
GACAACCTGC CGTACTCGCT GGCGCGCCGC ACCGACGCTC CCGGGGCGCA GGCGCTGAGG
ACCGCGCCGG GCGTCGAGGT GTTCACTCGG GCCCGCGACG GCGCGATCCT GGCGGCGTTC
CCGAACAAGT GGCGGCTGCA GACCGTCAAG GGCAACGACC CGAACCTGAA GCTGGACCCG
TTGCTGGCCG AGGTCACCGA CGAGTAG
 
Protein sequence
MSQVKAEAAR RRTFAVISHP DAGKSTITEA LALHAQVIGE AGAVHGKGGR KGVVSDWMAM 
EQQRGISITS AVLQFSYRDS VVNLLDTPGH ADFSEDTYRV LTAVDCAVML LDAAKGLEPQ
TLKLFEVCRH RRIPVVTFIN KWDRPGMEAL ELMDEIESRI DIKPTPLTWP VGIAGDMHGV
IDRRDGSMIH FERAPGGARA ATEELVDAEE AKARYGEDYT QALEEIELLE ASDATHDQKL
FLNAVTTPVL FGAAVANIGV RQLLDVLIDH APAPEPRPDT SGNPRPVEAP FSGFVFKIQA
NMNPAHRDQV AFVRVCSGRF ERGMVVTHEP SGRPFTTKYA QSMFGSARDT IDEAFPGDVI
GLVNATNLGM GDSLFVDKKV EFPALPSYAP EHFAQVRCDD TSKAKRFRRG IAQLDAEGVV
QVLYSDARGD AAPVLAAVGP MQFEVASARL SGEFNVPVSV DNLPYSLARR TDAPGAQALR
TAPGVEVFTR ARDGAILAAF PNKWRLQTVK GNDPNLKLDP LLAEVTDE