| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1142 |
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| Symbol | |
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| ID | 8882328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1220727 |
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| End bp | 1222577 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003509945 |
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| Protein GI | 291298667 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.163498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.236826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT CAAGTTTCAC GGTGGCGTCG ACGAGCGTGT CCCGTCGCCG GCTGTTCCAG
GCGGCGGGTC TCGGCGCCGC GGGTGCGGCC GGACTGGGAA CCATGACCGC CTGCAAGGCC
GACCCGGGTA TCCAGGGCAA AGGCGAGTTC CACGGCGGCT ACCCCTACGA GACCCCGCCG
GACGGCCACT TCAACACCGC CGGAGCCCCG TACGCGGTGG TGCCGCACGT GTTCGTCGAG
GGCATGTACC TGGACCTGAC CTGTATGCCC GGCGGTTACT ACTGGTGGGA CAAGCAGGAA
TGGGAGTACT TCCTGGCCGA GAGCTTCGAG CTCGACGACA AGGAGAACAC CTTCACCCTC
AAGGTGCGTG ACGGTCTGAA GTGGAGCGAC GGGGAGCCGC TGACCGCCAA GGACTTCGAG
ACCACCTACT GGTTGTGCTG GATCCGCAGC AACCCGATGT GGAAGTCGCT CGACAGCCTC
AAGGCCACCG ACGACATGAC CATCGAGGGC AAGCTGAGCA ACCCGTCCTC GGTCATCGAG
CGCTACATGC TCAAGACCAA CGTGGCGCCC AGCCACAACA AGGACTCCAA GATGGGCAAG
ACCTACCGGG ACTTCGCCGA GGCGGCGATG AAACTGCACG AGGACGGCAA GGACCAGACC
TCCAAGGAGG GCGAGAAGCT CGGCGCCGAC CTGGCCAAGT TCCGGCCGGA GAACCTGCTG
ACCTCGGGTC CGTTCAAACT GGAGAAGAAG GACTTCACCA AGACCCAGAT GGTGTTGACC
AAGAACAAGA ACGGCTTCAA CGCCGACAAG GTCAAGTTCG ACAAGGTCGT CGTCTACGAG
GGCGAACTGC CGCAGATCAC GCCGCTGGTC AAGGACAAGT CCGTCGACTA CGCCTCCCAC
GGTTTCGCGC CCAACCAGGA GAAGAAGTTC AAGCGCGACG GTCACAAGAT CGTCCGGCCG
CCGGTGTACT CCGGGCCGTC GCTGTACATC AACTTCAAGG AGGTGCCCGA GTTCAAGGAC
GTGCTGACCC GGCGCGCCAT CGCGCACGCC ATCAACCGCG CCGACGCGGG CAGTATCGCC
CTGGGCGACT CCGGTCCGGC CGTGAAGTAC ATGGCGGGCT TCTCCGACAT CATGGTCCCC
GACTGGATCT CCAAGGAGGA CCAGGACGCC TTCGACACCT ACGAGCACGA CCTCGACAAG
GCCGCCGAGC TCATGGAGAA GGCGGGCTGG AAGAAGGACG GTGACGTGTG GGCCAGGGGC
GACAAGAAGA TGGACTACGA GATCAAGTGG CCCTCCACCT ACGCCGACTG GTCGGCCTGC
GGTGACGCCA TCGTGGACCA GCTGACCGAC TTCGGCATCA AGCTGACCGC GCAGCCCGTC
GACGAGGAGC AGTACCTCGA GGAGATCGAC AAGGGCGAGT TCCAGATGGC CATCAACGTC
TGGGGCTCCT CGCAGCACCC GCACCCGCAC TTCGCGTTCG TCGCCGACCT GTTCACCCAC
AACACCCCGA TCGCCAAGAA CAACGGCGGC GACGGCATCG CCTTCGACCT GAAGGTGAAG
TCCAAGAAGC ACGGCGAGGT GGACCTGGAG GAACTGGTCC TCAAGGCCGG GCAGGGACTG
GACGAGAAGG AGCAGAAGGC CAACGTCACC AAGGTGGCGC AGGTGTTCAA CGAACTGCTG
CCGATCATCC CGATCTGCGA GCGGTACTCC AACAGCCCGA TCCTGGAGGG CGAGGGCAAC
CGGGTCAAGG ACTTCCCCGA CGAGGACGAC CCGATCTACA AGAACTCGCC CTACGCCGAC
AACCCGATCA CCCTGGGAAT CGTGACCGGC AAGATCACTC CCAACGACTA A
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| Protein sequence | MTDSSFTVAS TSVSRRRLFQ AAGLGAAGAA GLGTMTACKA DPGIQGKGEF HGGYPYETPP
DGHFNTAGAP YAVVPHVFVE GMYLDLTCMP GGYYWWDKQE WEYFLAESFE LDDKENTFTL
KVRDGLKWSD GEPLTAKDFE TTYWLCWIRS NPMWKSLDSL KATDDMTIEG KLSNPSSVIE
RYMLKTNVAP SHNKDSKMGK TYRDFAEAAM KLHEDGKDQT SKEGEKLGAD LAKFRPENLL
TSGPFKLEKK DFTKTQMVLT KNKNGFNADK VKFDKVVVYE GELPQITPLV KDKSVDYASH
GFAPNQEKKF KRDGHKIVRP PVYSGPSLYI NFKEVPEFKD VLTRRAIAHA INRADAGSIA
LGDSGPAVKY MAGFSDIMVP DWISKEDQDA FDTYEHDLDK AAELMEKAGW KKDGDVWARG
DKKMDYEIKW PSTYADWSAC GDAIVDQLTD FGIKLTAQPV DEEQYLEEID KGEFQMAINV
WGSSQHPHPH FAFVADLFTH NTPIAKNNGG DGIAFDLKVK SKKHGEVDLE ELVLKAGQGL
DEKEQKANVT KVAQVFNELL PIIPICERYS NSPILEGEGN RVKDFPDEDD PIYKNSPYAD
NPITLGIVTG KITPND
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