| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1112 |
|---|
| Symbol | |
|---|
| ID | 8882297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1183203 |
|---|
| End bp | 1184636 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_003509915 |
|---|
| Protein GI | 291298637 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACTT TGGAGCTGGC GCGGTTGCAG TTCGCCACCA CCACCGGAAT CCACTGGCTT
TTCGTGATGC TCACGTTGGG GCTGGTGCCG TTGGTGGCGA TCGTGAACAC CCGGGCGGTT
TTCACGCGCG ATGCCGACAA GCGGGAGGGG TTGGTGCGGC TCGCGAAGTT CTGGGGGCAG
CTGTATGTCA TCAACTACGC GTTGGGGATC GTCACCGGGT TGGTGATGGA GTTCCAGTTC
GGGTTGTCGT GGAGCGGGTT GAGCGAGTTC GCGGGCAATG TGTTCGGCGC GCCGTTGGCG
TTGGAGACCA TGATCGCGTT CTTCGCCGAA TCGACGTTTC TGGGCATGTG GATCTTTGGC
TGGGACAGGT TGCGGTTGGG GACGCAGGCG GTGCTGATCT GGTTGGTGTG CCTGACGGCG
TACGCGTCGG CGTTCTGGAT TCTGGTCGCG AACGGGTTCA TGCAGAGTCC GGTGGGGTAC
GAGGTGCGGG AGGGGAGGGC GTACCTGACC GATTTCGCGG CGCAGTTGAC GAACCCGAAT
GCCACTGTCG CGTTCGGACA TATTCTGACG GCGGCTTTGC TGACCGGTGG GTTGTTCGTG
GCGGGGGTCA GTGCCTTTCA TCTGTTGCGG CGTACGAGGG AGCGGGAGTT CTTTCGGACG
GGGTTGCGTA CCGGGGTGAT CGCGGCGGCG GCCTCGACGT TTCCGGTGTA CATGCTGGGC
GCGGCGCAGT TCGCCGTGCT CGCCGACAGC CAGCCGATGA AGTTGGCGCT ACTCGCCGGT
GAGGGGACCT CGGAGTTGCA GAAGGACATG GTCGAGCGGC ACGGGCCCGG TGACTACGTG
CCGCCGGAAT GGATCGAGAC GTGGCTGCAC ACCATGGCCA ACATCGGGTA TCTGGTGTCT
ACTTTGGCGT TGTGCGCGCT GTTGGTGCTG TTTCGGGCCC GGTTCACCCG TTCCCGGCTG
TTGGCGATCG TCATGGTGCT GGCCGTCGGG GGGTTGTTCG GCCTGTACCT GGGCAGTTAT
CTGTTCGACA CTCCCGGGCC GTACAACGAG ATCATCATGC CCGCCTGTAT CGCGCTGGCC
GCCGTGGTGC TCGGGTTCGG GGGTCGGATC CGGCGGTGGC GTGGCCTCGG GTGGCTGCTG
GTCGTGGCGA TACCGCTGCC GTTCGTCGCG TCGGTGGGTG GCTGGTTGTT TCGGGAGGTG
GGACGGCAGC CGTGGATCGT CTACGGCGAG CTGAAGGTGT CCGATGCCGT GTCGCCGGTG
AGTTTCGGGC ACATGTTGAC GTCCTTGGTG ATCTTCGTGG GTGTGCTCGG CGCGCTGGCG
GTCACGAACT GGACGCTGAT CGCCCGGTTC GCGCGCCGGG GTCCGGCGGC GTCGCAGTTG
GGGGTCGCGC GCGACGAGGT ACCCGTTCTC GAGACCGTTG GGAGTTCTTC ATGA
|
|---|
| Protein sequence | MDTLELARLQ FATTTGIHWL FVMLTLGLVP LVAIVNTRAV FTRDADKREG LVRLAKFWGQ
LYVINYALGI VTGLVMEFQF GLSWSGLSEF AGNVFGAPLA LETMIAFFAE STFLGMWIFG
WDRLRLGTQA VLIWLVCLTA YASAFWILVA NGFMQSPVGY EVREGRAYLT DFAAQLTNPN
ATVAFGHILT AALLTGGLFV AGVSAFHLLR RTREREFFRT GLRTGVIAAA ASTFPVYMLG
AAQFAVLADS QPMKLALLAG EGTSELQKDM VERHGPGDYV PPEWIETWLH TMANIGYLVS
TLALCALLVL FRARFTRSRL LAIVMVLAVG GLFGLYLGSY LFDTPGPYNE IIMPACIALA
AVVLGFGGRI RRWRGLGWLL VVAIPLPFVA SVGGWLFREV GRQPWIVYGE LKVSDAVSPV
SFGHMLTSLV IFVGVLGALA VTNWTLIARF ARRGPAASQL GVARDEVPVL ETVGSSS
|
|---|
| |