Gene Snas_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1084 
Symbol 
ID8882269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1151760 
End bp1152485 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509887 
Protein GI291298609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0429154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA CACCCGCCGA CCAACCGCAT CCCGGCGAGC CGCACCACGA ACGGCTCGGC 
GACAAGCTCA ACTGGCTGCG CGCCGGGGTC CTGGGCGCCA ACGACGGCAT CGTCTCCACC
GCCGGAATCG TCGTCGGTGT CGCCGGGGCC AGCACCTCGC GACTGGCGAT CTTCACCGCC
GGACTCGCCG CGCTGGTCGC GGGCGCGCTG TCGATGGCGG GCGGCGAGTA CGTCTCGGTG
TCGAGCCAGC GCGACACCGA ACGCGCCATG ATCCGCAAGG AGAAGCGCGA GCTCAAGACC
ATGCCCGAGG CGGAGGAACG CGAACTCGCC GGGCTGTATG AACAACGTGG ACTGTCGCCG
GAGCTGGCCG CCGAGGTGGC CCGGGAACTG ACCAAGAAGG ACGCTCTGGC CGCGCACGCC
GAAGTCGAGC TCGGCATCGA CCCCGATGCC CCGGCCAACC CGTGGACCGC CGCCTTCGCC
TCGTTCGTGT CGTTCTCGAT CGGCGCACTG CTGCCGCTGG TCGCGATCCT GCTGCCGTCG
GTGTCGCTGC GCGTGGGCGC CTGCGCGGCC GCGGTCGTCC TGGCGCTCGT ACTGACCGGC
CTCATCAGCG CCCGGCTCGG CCAGGCGGGG CCCGGCCCCG CGATCGCCCG CAACGTCGGC
ATCGGCGTGG TGACGATGGC CGTCACCTAC GTCGTCGGCC ACCTGTTCGG GGTGGCCACG
GGCTGA
 
Protein sequence
MTDTPADQPH PGEPHHERLG DKLNWLRAGV LGANDGIVST AGIVVGVAGA STSRLAIFTA 
GLAALVAGAL SMAGGEYVSV SSQRDTERAM IRKEKRELKT MPEAEERELA GLYEQRGLSP
ELAAEVAREL TKKDALAAHA EVELGIDPDA PANPWTAAFA SFVSFSIGAL LPLVAILLPS
VSLRVGACAA AVVLALVLTG LISARLGQAG PGPAIARNVG IGVVTMAVTY VVGHLFGVAT
G