Gene Snas_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1072 
Symbol 
ID8882257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1138488 
End bp1140602 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509875 
Protein GI291298597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCGA TGTGGGTGCC GGCCAACGAC ATCGAACAGC ATATGCGTGA GGCGCTGCGA 
GCCGGTAACC AGGAAGAATA CTTCCGGCTG CTGGCCCGCA CAGACTTGCT GCTGCCGTTC
GCCGAGGATA CGTCTCCCAG TTCCAACGGA ACCGGGAGCT GGGCCACTTG GGCGACCGAG
GACCGCACAC ACGTGCTGGT CTTCACATCG CCCGAGGCCA TGCGCGCGTG CCTGCACGCG
CACGCCGGTG CCTTCCGCAC CGTCAGCTTC ACCGCGCTGG CCGACGCGTG GCCCGACAGC
GACTGGTGGC TGGCCGTCGA CCCGGGTACC CCCATCGAGG GATATCTGCC CGCCTGGTTC
GTGCGGCAGG TCGCCAGCGG CGACACCCAT CTGCCCGACG ACCAGGCCCC GCACTCGCAG
CCGCCGATGT ACGCGGCCAA CGACTATCCG CCGCCGCGCA CCGACTACCC GCAGTCCGCG
CCGCCGTCGC AGTTCGGCCA GTTCGAGGCG GCCCCGCCGC CACCCCAGTT CGGGCAGTTC
GAGGCCTCGC CGTTCCAGCA GGCCCCGCCG CCCGACCCCG GACCGCGCTA CGGCGAGACG
GCTCCGTCCG CCCCGAGTGC CGGACCCGGG GGACTGCCGC GCCGGGAACC GGCCGCCGCC
AGTCCCGCGC CCGAACCGTT CTCGCAGCAG CCCGCCGACC CCTACGACGC GGGGCTGCCG
CAGCGCGACG CCTACGGCCA GCCCTCCGAG GCCTTCAACT CCGGACTGCC GCAGCGCGAC
TCGTATCCGC CCGCCGAAGC GCCGCCCGTC CAGGACCCGC CCTCGGGTAC CTACGACTCG
CCGATGAGCT CGGCGATGCC GCGCCGCGAG CCCATGGACT CCGGCTTCGG CCAGCAGCCC
GAACCCGAGC AGCCCGCCTG GGAACCGGCG CCGAGGCCCG AGGAACCCGC CTGGCAGGCC
CAGCAGACCC AGCAGCCCGC CTCCGACGGC TACTCGGCCG CCTCGCGGCT GCCGGTCCCG
GTGTCGACCG CGCTGCCGGA GTGGCCCAGC GAGGACGCCG TGGAGGACGA GCTGGCGCTG
GCCGCGTCCA CCGGCGACAC CAAGGCCTAC CTGAGCGTGC TGCTGCGCGC CTGGGCGTAC
CTGCCGGTCG CCGAGGACTG CCCGCCGTCC GCGCGTCCCG GTGACCCGGA GTTCCGCTGG
CACACCGACC TCATCGACGG CGCCTACACG ATCACCGCGT TCACGTCGCT GTCGCGGCTG
ATCGCCCGCT ACGGCGACCG TCCCCACATC AACACCACCT TCGGCCGTCT GACGGCGCAG
TGGCCGGGCC TGGAGTACTC GCTGTACGTC AACCCGTCCA CCGAGGTGGG CGCGAACGTA
CCGGGCCCGC AGGTGACCAC CCTGGTGACC TGGGCCCGCA CCCAGGGTCT GTTGCAGCCC
GCGCTGGACA TGGACGCGCT GGGCGCGCCC CGCAGTCCGG CGTCCAACCA CGGCTCGGCG
CAGACGCAGG CCCCGCCGCC ACCGCAGGCC CAGGCCCCCG AGCCCGCGGC GGCCACCCCG
GCCCCGACGG CTCCGGAGCT GATGCAGAAG GTGCTGCCGC ACCAGCAGGT CGCGATGACC
CTGGAACGCG GCTACGACCG GGTGGCGGGC TTCGTGCACC GCTACAACGA GGTCGCCGAC
CTCAACACAC CCGAGCAGCT CTACAACGCA CTGGGCCTGC TGCGCGACGG CGTCGACTTC
TCGCCGACCG ACGAGTCGGT GCACGTGATC CGCTGGGTCG GGCACCGCGG CGACCTGTAC
CGGATCGCCT ACGGCGGCAA CGATCCCGCC ACCGCCGAAC GCAACGGCGG CTGGATCGTG
GAACCGCCGC CGTTCTCCGG CGACGGCTAC GCGCCCAGCG TCGAGGGCCG CCGGATCGTG
GAGTACAAGG TGGACAGTGT GCGGCTTCCG CACGGCGCCA CCATGACCCG CGTCAGCGCC
GACGGCCGCA GCGAGGACAT CGCCGTGTAC GACTCCGACC GCCGGGAATG GATCCGCGCG
GACATCGAGG CGGCGGCCTC GTCCTGGGAC ATCAGCCCGG CTGGCGACTT CAGGCAGGAG
CAGCAGCATG CGTGA
 
Protein sequence
MTSMWVPAND IEQHMREALR AGNQEEYFRL LARTDLLLPF AEDTSPSSNG TGSWATWATE 
DRTHVLVFTS PEAMRACLHA HAGAFRTVSF TALADAWPDS DWWLAVDPGT PIEGYLPAWF
VRQVASGDTH LPDDQAPHSQ PPMYAANDYP PPRTDYPQSA PPSQFGQFEA APPPPQFGQF
EASPFQQAPP PDPGPRYGET APSAPSAGPG GLPRREPAAA SPAPEPFSQQ PADPYDAGLP
QRDAYGQPSE AFNSGLPQRD SYPPAEAPPV QDPPSGTYDS PMSSAMPRRE PMDSGFGQQP
EPEQPAWEPA PRPEEPAWQA QQTQQPASDG YSAASRLPVP VSTALPEWPS EDAVEDELAL
AASTGDTKAY LSVLLRAWAY LPVAEDCPPS ARPGDPEFRW HTDLIDGAYT ITAFTSLSRL
IARYGDRPHI NTTFGRLTAQ WPGLEYSLYV NPSTEVGANV PGPQVTTLVT WARTQGLLQP
ALDMDALGAP RSPASNHGSA QTQAPPPPQA QAPEPAAATP APTAPELMQK VLPHQQVAMT
LERGYDRVAG FVHRYNEVAD LNTPEQLYNA LGLLRDGVDF SPTDESVHVI RWVGHRGDLY
RIAYGGNDPA TAERNGGWIV EPPPFSGDGY APSVEGRRIV EYKVDSVRLP HGATMTRVSA
DGRSEDIAVY DSDRREWIRA DIEAAASSWD ISPAGDFRQE QQHA