Gene Snas_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1048 
Symbol 
ID8882233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1108298 
End bp1108861 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509851 
Protein GI291298573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.410023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA GCGTTCCTCC CACCGTCGAC GAGCGTGACA ACCTGATCAA GTACGTCGCC 
CAGCAGCGCG ACACCTTCCG CTACGTGGCC CACGGGCTCA CCGACGAGCA GGCCCGCATG
CAGCCCACCG CCGGAACCCT GAGCATCGGC GGGCTGATCA AACACATCGC CCAGATGGAA
CGCAGCTGGG TGGCGACGGT GACCCAGACC GAGTACCAGG TCGACTACGT CAACGGCTTC
ACCATGCTGG CCGACGAGAC CCTGGAGGGG CTGCTGGCCG ACCTGGCCAA GGCGGGCGAG
GAGACCGAGC GGGCGCTGGC CGACCTCGAC ATGGACCACC CGGTGCCGGT TCCCGACGCG
CCCTGGTTCC CCAAGGACGT CGAGAACTGG TCGGTGCGCT GGGTGCTGGC GCACCTGATC
GAGGAGATCG CCCGGCACGC GGGTCACGCG GACATCATCC GGGAGTTCAT CGACGGCAAG
ACCATGTACG AACTGCAGGC CATGGCCGAC GGCTGGCACG AGCAGTACCT GGCGATGCAG
AACAACTGGG GCGGCGACGA GTAG
 
Protein sequence
MTSSVPPTVD ERDNLIKYVA QQRDTFRYVA HGLTDEQARM QPTAGTLSIG GLIKHIAQME 
RSWVATVTQT EYQVDYVNGF TMLADETLEG LLADLAKAGE ETERALADLD MDHPVPVPDA
PWFPKDVENW SVRWVLAHLI EEIARHAGHA DIIREFIDGK TMYELQAMAD GWHEQYLAMQ
NNWGGDE