Gene Snas_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1035 
Symbol 
ID8882220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1095819 
End bp1096529 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003509838 
Protein GI291298560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCT TCTCCGAGGC GCTGACCTGG CTCAACGACC CGCTCAACTG GACCAACCCC 
GACGGGGTGT TCGCGCTGTT GGGCCAGCAC CTGGCGCTGT CGGGCGCGGC GCTGTTGCTC
GCGCTCGTCG TGGCCTGGCC GCTGGGGGTG TGGCTGGGGG CCACCGGACG CGGCGGCACC
ATCACCGTCG TCGTGTCCAA TGTGACGCGC GCGGTGCCCA CTATGGCGCT GTTGAGTCTG
CTTCCCTTGA CGGCCCTGGG TTTCGGTCCA CAGTCGGTGG TCCCGGCGCT GGCGTTGTTC
GGGGTGCCGC CGCTGCTGGC CACCGCCTAC ACCGGCATGC GCGAGGTCGA CCCCGACGCC
CGCGACGCCG CCCACGGCAT GGGCTTCTCA CGATCCGGGA TGCTGTTCAA GGTCGAGCTG
CCGCTGGCGG TGCCGCAGCT GGCCAGTGGT TTTCGCACCG CGGCGGTGCA GATCGTGGCC
ACCACGACGC TGGCGGCACT GTTCAACGGC GGCGGGCTCG GAGAGATCAT CAGCCGGGGT
TTCGGCTTGG GGCTGGCCAA GGGCGGCGGC GAGATCCTCG CCGGTGGCAT CCTGGTGGCG
GGCCTGGCGC TGATCGTCGA GGGCGTGCTG GCGGTGGGCG AGAAATACGT CACGCCGATC
GCGCTTCGCG ACCTCTCGCG CACCAAGGCG AGGGTGTCAA TGTCCGTCTG A
 
Protein sequence
MNIFSEALTW LNDPLNWTNP DGVFALLGQH LALSGAALLL ALVVAWPLGV WLGATGRGGT 
ITVVVSNVTR AVPTMALLSL LPLTALGFGP QSVVPALALF GVPPLLATAY TGMREVDPDA
RDAAHGMGFS RSGMLFKVEL PLAVPQLASG FRTAAVQIVA TTTLAALFNG GGLGEIISRG
FGLGLAKGGG EILAGGILVA GLALIVEGVL AVGEKYVTPI ALRDLSRTKA RVSMSV