Gene Snas_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1011 
Symbol 
ID8882196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1073051 
End bp1073758 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003509814 
Protein GI291298536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00242771 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGTC GCAAGTCGGG GTTGCGGACG GTCGACGTGG CGCGCGGCGC GGGCTACTCG 
GTGCAGCAGG TGCGGATCCT GGAACGCGAC GGCGTGCTGC CGCCGGTGGA GCGCACCGCG
AGCGGCTACC GGATCTACGC CGAGGCCCAC GTCCAAGCGG CGATCGCCTA CCGCGAGCTC
GCGGCCGGGC TCGGCCCGGT CGACGCGAAA CAGCTGATGC GAACCGCGCT GAACCGGCCG
ACGGCCGAAC TGCTGGCCAG CCTGGACGCC GAGCACGCGG ATCTGCACGC CGAGCGTCGG
CGGCTGCGAC TCGCCAGGAA GGCCGCCGAG TCGATCACCG CCGAACCGCT CGACGACGTG
CGGCCCTCGG ACGTGATGAG CATCGGTGAA CTCGCCGAGG CCCTCGGCGT GCGGGCCTCG
ACGTTGCGGC ATTGGGAATA CGAGGGGCTG GTCGCCCCGG ATCGCACCGT CGGTCGGCGG
GTCCGCAGCT ATTCGCCCGC CGCGGTGCGC GACGCGAGGA TCGCGCACCA GCTGCGGCTG
GCCGGGTACC GCATCGACGC GTTGCGGACC CTGATTCCGC AGCTGAGCAC CACCCGCGAC
CACGACGAGG TCCTCAAGGG ACTGAGTGCT CGCGATTCCC GGCTCGACGA ACGTTCCCGG
GCGCTGCTGC ACGGCACCGC CGCGCTCGTC GCCATGAACC TCGTGTGA
 
Protein sequence
MKSRKSGLRT VDVARGAGYS VQQVRILERD GVLPPVERTA SGYRIYAEAH VQAAIAYREL 
AAGLGPVDAK QLMRTALNRP TAELLASLDA EHADLHAERR RLRLARKAAE SITAEPLDDV
RPSDVMSIGE LAEALGVRAS TLRHWEYEGL VAPDRTVGRR VRSYSPAAVR DARIAHQLRL
AGYRIDALRT LIPQLSTTRD HDEVLKGLSA RDSRLDERSR ALLHGTAALV AMNLV