Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1011 |
Symbol | |
ID | 8882196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1073051 |
End bp | 1073758 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003509814 |
Protein GI | 291298536 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00242771 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGTC GCAAGTCGGG GTTGCGGACG GTCGACGTGG CGCGCGGCGC GGGCTACTCG GTGCAGCAGG TGCGGATCCT GGAACGCGAC GGCGTGCTGC CGCCGGTGGA GCGCACCGCG AGCGGCTACC GGATCTACGC CGAGGCCCAC GTCCAAGCGG CGATCGCCTA CCGCGAGCTC GCGGCCGGGC TCGGCCCGGT CGACGCGAAA CAGCTGATGC GAACCGCGCT GAACCGGCCG ACGGCCGAAC TGCTGGCCAG CCTGGACGCC GAGCACGCGG ATCTGCACGC CGAGCGTCGG CGGCTGCGAC TCGCCAGGAA GGCCGCCGAG TCGATCACCG CCGAACCGCT CGACGACGTG CGGCCCTCGG ACGTGATGAG CATCGGTGAA CTCGCCGAGG CCCTCGGCGT GCGGGCCTCG ACGTTGCGGC ATTGGGAATA CGAGGGGCTG GTCGCCCCGG ATCGCACCGT CGGTCGGCGG GTCCGCAGCT ATTCGCCCGC CGCGGTGCGC GACGCGAGGA TCGCGCACCA GCTGCGGCTG GCCGGGTACC GCATCGACGC GTTGCGGACC CTGATTCCGC AGCTGAGCAC CACCCGCGAC CACGACGAGG TCCTCAAGGG ACTGAGTGCT CGCGATTCCC GGCTCGACGA ACGTTCCCGG GCGCTGCTGC ACGGCACCGC CGCGCTCGTC GCCATGAACC TCGTGTGA
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Protein sequence | MKSRKSGLRT VDVARGAGYS VQQVRILERD GVLPPVERTA SGYRIYAEAH VQAAIAYREL AAGLGPVDAK QLMRTALNRP TAELLASLDA EHADLHAERR RLRLARKAAE SITAEPLDDV RPSDVMSIGE LAEALGVRAS TLRHWEYEGL VAPDRTVGRR VRSYSPAAVR DARIAHQLRL AGYRIDALRT LIPQLSTTRD HDEVLKGLSA RDSRLDERSR ALLHGTAALV AMNLV
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