Gene Snas_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0963 
Symbol 
ID8882148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1020161 
End bp1020940 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509766 
Protein GI291298488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAC AACCCGGATT GCTTCAACCT GCTGGCCCAG CCCAGTCTGA TTGGTTGGTG 
CATTTTTGCG GCCGACCGCC AGGCACCAGA AAGTCGCCAT GTTTGCCGGA AGACATAGAT
GATCTAACTG CGGAAGAACG TCTCGAAAGT ATTCTTTGGG AGGAAAGGGT TAGAGGGTTT
GCTACCTTCA GCAGGCTTGA TGGCCCCCGT ATGGTGTGCT TTTCTGAGGC ACCACTTCTC
CATTTGAACT GGTTTTTTCA AGACAAGAAG TGGCCACAAT GGGGGCTAAT TTTCTCTCGG
CAACAGGTGT ACGATGTCGG TGGAGGGCCG GTTTGGCACC TTCGTGGCAC GGAGATTGAC
CGATTGAATC CTGAGTTGCG GCATTGGGCT GTGCGTCTTG AAGTTGGTCC AGCACGGCGA
TCTGACTGGC TTCATGAGCG GGAGTGGCGG ATCCCTCTTC CGGACGGATC AGAAGCGATA
AGCCTGACTA CATTTACTCC AGATAGGTCA GAAGAGTCTC TTCCGCTCGC ACTTAAGTTG
GAAGCAATCC TCATTGCGAC AGCCGATTGG CAACCTTCGG AACGCTGGGA AGATGTAGAG
ACCGGACACT TTCTCAATGA GGGCGGCGGT GGCTATGTGA CGCCTGATTA CCATGGAGCC
ATCCCTGAAA CCATCTCGGC GCCGTTGTTG CCGATTCTCT GGGAAAAGAC AGTTCGCGTC
ATGTGGGATT TCGACAGAAA GACCTTTGTG AAAGTGGATG ACACTGGCCA CGCTCATTAA
 
Protein sequence
MFGQPGLLQP AGPAQSDWLV HFCGRPPGTR KSPCLPEDID DLTAEERLES ILWEERVRGF 
ATFSRLDGPR MVCFSEAPLL HLNWFFQDKK WPQWGLIFSR QQVYDVGGGP VWHLRGTEID
RLNPELRHWA VRLEVGPARR SDWLHEREWR IPLPDGSEAI SLTTFTPDRS EESLPLALKL
EAILIATADW QPSERWEDVE TGHFLNEGGG GYVTPDYHGA IPETISAPLL PILWEKTVRV
MWDFDRKTFV KVDDTGHAH