Gene Snas_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0950 
Symbol 
ID8882134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1006359 
End bp1007951 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509754 
Protein GI291298476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.184254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAGA AGCTGTGCAC GAAGAAGGGC ATCGCGTGGA CGACGGTGGG CGCGGTGGCC 
GTGGCGGGAT TCGGCGCGGG CTACGTCTTC GGGGCCTTCG ACGGCCTGGC GGCCGCCGAA
GGGGAACCCA ACGGCGGCAA CGACATCGCG GTGTCGGCCG ACGCGTACAC CTCCTCGGCC
AAACCGGACC ACAATGCCGG GTCGGTGACC CGGCTGCTGA CCGGCGGCGG CGACGCGACC
GGGGTGACGG TGACGTATCT GCGGTTCGCG CTCACCGAGG CCCAGGCCGC CGGGGGACTG
GTGCTGCGGT TGCCGGTGGC CGAGACCGTC GACAACGAGC TCGTCGAGGT CGCTCACGTC
TCTCCGGTGT GGTCGGAAAG CGACATCACC GCCGCCGAGT CACCGCCGAT GGGTTCGGTG
CTCGACACCA CCCGTGCCTC CACACAGGCC AGTCAGCTGG AGTTCAACCT GCCCGCCGGT
TCCCTGCGCG CGGGGGACGT CGCCTTCGCC GTCACCACCC CGGCCGCCAA GGCCACCCTC
AGTTTCCACT CCCGTGAGTC CGGTGTGGAC GCTGCGAGGC TCAGTCCGGT CCGCGCCGAG
TCGGTCGCGG ACGAACCGCT GCCCCGGCAG CCGGAGAAGG GCGGCTCGTG TCCGGTGGGC
GCCAAGCTGG TGCCCTACTG CGGCGCGCTG CTGGGCGTGG CCCCCGGCGC CCACACCGAC
GGCTCCAAGA CCGCCGCGCT GCGCAACTTC GAGGACAACA CCGGCCGGGG CCAGCACATC
TACCACAGTT ACCACCGCGG CGACGTCATG TTCCCCACCC GCGAGGAGAT CGCGGTGGCC
ACCGAGGCGG ACAACCCGCG GGTGCTGTTC CTCAACTGGA AACCCCGGGG CGCCAGCTGG
GCCGAGATCG CGGCGGGTGA TCCGGCGACC GACGCCTACC TGGAGCGGCT CGCGGCCCAC
ATCACCACGT ACTACGGCGA CAAACCGTTC TTCTTCACCG TGCACCACGA GCCCGAGGAC
GACGTGCGCG CCGACCCCGA GTCGGGGTAC ACCGCGCCCG ACTACGCGGC CATGTTCGGT
CATGTCGTCA ACAAGCTCCG CGCCGAAGGC GTGTCCAACA TGGTCTCCGT CATGGTCTAC
ATGGCGTATC TGAAGTGGAC CCAGCAGGAC TGGCACGACG AGCTGTACCC GGGCGACTCA
GTCGTCGACT GGGTCGCCTG GGACACATAC GGCTACAGCG ATCCCGGCTA CGGCCACGGC
GACTTCGCCG ACATCGTCAA CCGGGAGGGC ACCCAGGGCC AGAACTGGCC CGGCTTCTAC
CGCTGGGCGG CCGAGACCTT CCCCGGCAAA CCGCTCATGG TCGCCGAATG GGGAGTCTGG
TACTCCAGCC GCAATCCCGA CCACCAGGCC GAGGTCTTCG CGGGTGCCGC CGACCAGCTG
GCGCACTTCC CGCGCCTGAA GGCGGTGGTG TACTTCGAAT CGGCCAGCGC CGAGGGCCGC
GACTCCCGGG TCGACGTCAG CCCCAAGGCC CTGGACGCCT ACCGCCGCTT CACCGACTCG
CGCGCGTTCT CGGTGGATCT CGGCCTGGGA TGA
 
Protein sequence
MWKKLCTKKG IAWTTVGAVA VAGFGAGYVF GAFDGLAAAE GEPNGGNDIA VSADAYTSSA 
KPDHNAGSVT RLLTGGGDAT GVTVTYLRFA LTEAQAAGGL VLRLPVAETV DNELVEVAHV
SPVWSESDIT AAESPPMGSV LDTTRASTQA SQLEFNLPAG SLRAGDVAFA VTTPAAKATL
SFHSRESGVD AARLSPVRAE SVADEPLPRQ PEKGGSCPVG AKLVPYCGAL LGVAPGAHTD
GSKTAALRNF EDNTGRGQHI YHSYHRGDVM FPTREEIAVA TEADNPRVLF LNWKPRGASW
AEIAAGDPAT DAYLERLAAH ITTYYGDKPF FFTVHHEPED DVRADPESGY TAPDYAAMFG
HVVNKLRAEG VSNMVSVMVY MAYLKWTQQD WHDELYPGDS VVDWVAWDTY GYSDPGYGHG
DFADIVNREG TQGQNWPGFY RWAAETFPGK PLMVAEWGVW YSSRNPDHQA EVFAGAADQL
AHFPRLKAVV YFESASAEGR DSRVDVSPKA LDAYRRFTDS RAFSVDLGLG