| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0949 |
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| Symbol | |
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| ID | 8882133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1004496 |
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| End bp | 1006181 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003509753 |
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| Protein GI | 291298475 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.323077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCTG TCACCTCCTC CCCCGGAACA TCCCTCGGCG ACCTCGCGGA CTCCGCACGC
AGACACCGCT GGCTACTCGT CGGCGCGACG CTGCTGGGCG TCGCGGCCGC CGGAGCCTAC
GCCCTGATCG TTCCCCGCGA ATACATCTCG ACGACCTCGG TCCTGGTGCA GCCCACCGGC
GCCGAGGAAT CCGCCGTCAC CGGCCAGCGC TCCAAGTCCG AGATCAATCT GGACACCGAG
GCCCAGCTGG TGACCTCCAC CGACGTGGCG ACCATCGCCG CCGACAGCCT CAACGACAAC
GATCCGGTGG CGCTGTCCGA GCAGGTGGTC GCCTCGGTCC CCGCCAACAC GTCCATTCTC
GAGATCGGCT TCGTCGCCGA CGAACCCGCC GCGGCCCGCA ACGGCGCCCG CGCCTTCGCC
GCCGCCTATC TGACGCACCG GGCCGAGACG GCCCGGGACC GGCTGTCGGA GCAGATCGAC
GGCGCCGAGT CCGACCTGTC GCGACTGCAC GCCGAACGGC GCAAGCTGGT GGAGCGGCTG
GACAAGATGG ACAGCTCCGA CCCCGACTTC GCCGAGGCCA AGAAGGACCG CGAGCTGGTG
GACGGCGAGA TCGCCGAGCT GTCGGCCAAC AGCGGCCGCT GGCGTGCCGC CGCCGAGTCG
GTGGGTTCGG GCCGCATCAT CAGCGCGGCC CGGGTCCCGA CCGCCGCCAC CTCGCCGCAC
CTCGCGACCG TGCTGGCCGC CGGTGCCCTG CTGGGCCTGC TGGCCGGGAT CGGCGCGGTG
GCCTTCCGGC GCCGGTTCTC GGTGCGGCTG TGGAGCGCCG CCGACCTGCC GCGCCGCTGC
GGCGTCGACG TGCTGGCGGC GGTTCCCGCC AGTGCCGTGC CGCGTGGCGA CGACGTCTTC
CCCGCCTTCG GGCCGCCCGG CCGGGTGTTC GGCAAGATCC GCAACGAGGT GGCCGCCGCC
CTGGACGGCA CCGCCGGGAT CGTCATCGTG GCGGGCGTGG TGCCGGGTTC GGCGTCCAGT
GTGGTTACCG CGAACCTGGC CGCCGCGATG GCGCGCGCCG GGGACAACGC CACCGTGGTG
TCGACGCACG CGGCCGGACC GATCACGGTG ACCTCGCAGC TGGACACGCT CGCGGTCCCG
GGTCTGTCCG ATGTGCTCGC CGACCGGGAC GAGCTGTCGG CCGCCACCCA CCGCGCCGCC
CGCTACCCCA CCCTCGACGT CATCGGCCCG GGCGGTTGCG CCACCGCGGC CGGCCCCTCG
CGGGAGGCGA TGTCGGAGCT GTACACCCGA CTGCGCGACC AGTCGTCCTA TGTGGTCGTC
GACGCCGCCC CGATGGCGGT GACGGCCCAG GCCCAGTCGC TGGCCACCGA CGCCGACGCC
GTGGTGCTGG CCGTCGAGTG CGGCCACGAC ACCGCCCGCG ACGTCGCCGA GGCGGTGCAG
GCGGTCCGCC GGGTCGGGGC CCGACTGCTG GGCGCCGTGG TGCTGCCTCG GCAGCCCAGC
CCGCGTGTCG ACCCGCTCGA GGTACCGTCC ACGGAGGCCA GTCACGAGGA CGGCAAGCGC
CGGACGCCCC GGCCCCGCCG GGCGGGACGC CGTCCCGCCG GTGACGACAC CCCGACCGAG
TCGCTGCCCC GCATCGAGGA CGAACCCGTC CCCGCCGCCA CCGCTTCGGG CGACAATGAC
GACTGA
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| Protein sequence | MDAVTSSPGT SLGDLADSAR RHRWLLVGAT LLGVAAAGAY ALIVPREYIS TTSVLVQPTG
AEESAVTGQR SKSEINLDTE AQLVTSTDVA TIAADSLNDN DPVALSEQVV ASVPANTSIL
EIGFVADEPA AARNGARAFA AAYLTHRAET ARDRLSEQID GAESDLSRLH AERRKLVERL
DKMDSSDPDF AEAKKDRELV DGEIAELSAN SGRWRAAAES VGSGRIISAA RVPTAATSPH
LATVLAAGAL LGLLAGIGAV AFRRRFSVRL WSAADLPRRC GVDVLAAVPA SAVPRGDDVF
PAFGPPGRVF GKIRNEVAAA LDGTAGIVIV AGVVPGSASS VVTANLAAAM ARAGDNATVV
STHAAGPITV TSQLDTLAVP GLSDVLADRD ELSAATHRAA RYPTLDVIGP GGCATAAGPS
REAMSELYTR LRDQSSYVVV DAAPMAVTAQ AQSLATDADA VVLAVECGHD TARDVAEAVQ
AVRRVGARLL GAVVLPRQPS PRVDPLEVPS TEASHEDGKR RTPRPRRAGR RPAGDDTPTE
SLPRIEDEPV PAATASGDND D
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