Gene Snas_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0809 
Symbol 
ID8881993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp857352 
End bp858140 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID 
Productxylanase 
Protein accessionYP_003509614 
Protein GI291298336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG CCATCTCCGC TTCTCAACCA ACAATTTCAG AACGCATCAC GGTTTATCCG 
GCCGACGACC GTTTCACCGG TCCCCGGCCA TCCGTTCTCG TCCTCCCCGG CGGCCGGTAT
CGGGAACTTC CGCCGCATGA GGGGGAGGGC TACGCTCGCT GGCTCTCCAG CATCGGGCTG
CACGCCTTCG TACTGGCGTA CCGGCTGTTG CCCGAACAGT TTCCGGCTCC GTTGGAGGAC
GCCCGGGCCG CTCTGGGCCA CATCAGGGGT GGTGAGCACG GGCTCGATGT CGGTTCCGTC
GGTGTCATCG GTTCCAGTGC CGGTGGACAT CTGGCGGGCC TGCTCATGAC CGGCACGGTC
TTGTCGACAG AGGATGGTGT GGTCGAGCCG CCCCGGCCCG ACTTCGCGAT CCTCGCCTAT
GCCCTGGCCG ACTTCGATCT GTTGCCGCCG GTGGCGGTCG AAGGGCTGTT GGGCGATCTC
ATGTTCCTGA AGGACGAGTT GTCGCCCGCC AAGCACGTGG ACTCGACGGT GTGTCCCACG
TTCGTGTGGG CGACGTCGGA GGATCCGCCG GGGCTGCCCA ACGCTCTGGA GTGGACCCGG
GTGCTGGCCG AGGCCGGGGT TCCCGTGGAG CTTCACGTTC TTCCGCGTGG GGGCCATGGC
ATCGGGCTGG CCGACGGTGT CGAGTACGGC GGGCAGGGTC ACGTGTTCAT CAAGCGCGAT
GCTCACACGG CGACGTGGAC CGACTCGTGT GAGCGGTGGT TGCGCCATGA GGGCGTTCTG
ACGACATAG
 
Protein sequence
MAVAISASQP TISERITVYP ADDRFTGPRP SVLVLPGGRY RELPPHEGEG YARWLSSIGL 
HAFVLAYRLL PEQFPAPLED ARAALGHIRG GEHGLDVGSV GVIGSSAGGH LAGLLMTGTV
LSTEDGVVEP PRPDFAILAY ALADFDLLPP VAVEGLLGDL MFLKDELSPA KHVDSTVCPT
FVWATSEDPP GLPNALEWTR VLAEAGVPVE LHVLPRGGHG IGLADGVEYG GQGHVFIKRD
AHTATWTDSC ERWLRHEGVL TT