Gene Snas_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0661 
Symbol 
ID8881845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp694518 
End bp695381 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509467 
Protein GI291298189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.228101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.619548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCTG ACCGGTTGCG TCGGTTGACC CTGACCCGGT TGAGCGACCC GTGCGCGGTG 
CAGGTGGCCG CCGCCCGGCG CGAGCGCCCG GGTCCGCCCG ACGGCGACCG GGTCCTGATC
ATCGCCGCCG ACCATCCGGC GCGCGGCGTG GTGCGCACCG GCGGCCGGTC CATGACCGAC
CGCGCCGACC TGCTGGACCG GTTGTGCGTG GCGCTGTCCC GGCCCGGGGT CACCGGGGTG
CTCGGCACCG CCGACATCCT GGAGGACCTG CTGTTGTTGG GGGCGCTGGA CGGCAAGCTG
GTCTTCGGTT CCATGAACCG GGGCGGGCTG GGCGGTTCGG TCTTCGAGGT CGACGACCGG
TTCACCGGCT ACGACGCGCG CTCCATCGTC GACATGGAGT TCGAGGGCGG CAAGATGCTG
CTGCGCGTCG ATCTCGACGA CGACCGCACC GCGCCGACGC TGGAGGCCTG CGCCCGGGCC
GTGACCGAGC TGGCCGGGCA CGGCCGGATC GCGATGGTGG AGCCGTTCTT GGCCCGCCGG
GTCCACGGGG CGCTGGTCAA CGACCTGTCC GCCGAGGCCG TCACCGCCTC GATCGGCATC
GCCTCGGGGC TGGGCGGCAC CTCGGCGTAC ACGTGGCTGA AGCTGCCCGC CGTCGACGAC
ATGGAGCGGG TCGCGGCGGC CACGACGCTG CCGATCCTGT TGCTGGGCGG CGATTCCGGC
GGTGATCACG CCGACCGGCT GCGCAGGTGG GAGGCGGCGC TGCGGCCGCC GAACGTGTGC
GGGCTGGTGG TGGGCCGTTC GCTGCTGTAC CCGTCCGACG ACGACGTCGC CGCGGCGACC
GACCAGGCGG TGAGTCTACT GTGA
 
Protein sequence
MDPDRLRRLT LTRLSDPCAV QVAAARRERP GPPDGDRVLI IAADHPARGV VRTGGRSMTD 
RADLLDRLCV ALSRPGVTGV LGTADILEDL LLLGALDGKL VFGSMNRGGL GGSVFEVDDR
FTGYDARSIV DMEFEGGKML LRVDLDDDRT APTLEACARA VTELAGHGRI AMVEPFLARR
VHGALVNDLS AEAVTASIGI ASGLGGTSAY TWLKLPAVDD MERVAAATTL PILLLGGDSG
GDHADRLRRW EAALRPPNVC GLVVGRSLLY PSDDDVAAAT DQAVSLL