Gene Snas_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0443 
Symbol 
ID8881625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp449607 
End bp450566 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509251 
Protein GI291297973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.254441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.765345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA AGACCGATTC CGAGTCCGGA GCACGCCTCC GGAAGCGCCG CAAGTGGCTG 
TGGTGGAGCA TTTTTCTGTC CGTGTTGGTG CTCTTGGTCG GCACTGCCAC CGTTGTCCTG
GGTGGCTACT TCACCGAGAA GGGGAAATGT CCGGAATCCA TACCTTCCAC CGGGGTTAAG
GAACCGGTGG GCGAGGCCAA TGAGAAGTGG CTCAAGCTGG TTGACAGCGG ATTCACACCC
TTCGACAAAG GGCCGGTAAA AGGTGCTGCC GAAGACCTTT CGTTCGGGTA TCTGCTGAAG
AACACATCCG AGTACGTGCT CTACAACGCC GACATTGACG TGAGCTTCAA GGACGCCAAC
GGCGACGACC CGACCGCGCT GCTCAAGAAA TCGGATCAGC GGGAGAACGC CAGTGTTCTT
GACAGCGTGA ATATCCCCGT CATTTTCCCA GGTCAAACTG TCGGCATGGG TTCAAGTATC
GCCATATGGA CAGAGCACGG CGAAGATCCT GAGACCGGCG AGCCCGTTGA TCTCGAGAAG
ATCGACTACG ACAAGTTGAC TCTGGACATC GATATGGCGT CCGGACAATG GTGGGAGCCG
AGCAACGACA AGTTGGACTT CACCAGAGTC GCCGCCAAGT CTGTGGACGT CGTTGACAGC
GAATCCTCCG AACATGAGTA CCTTGACGGT CGCGAATGGC TGTCGGCTGA CATTGAGTAC
CTCGTTGAGT CCAAGGCATG CCAAGACCTG AAGGCTTACA AACCATCTAC TGTGGTTTTC
GACGCGGAGA ACAAGATCGT TGGGGGAGAC ATCTCCGGCT CCAAGGGGGA CACCGGCGAG
GGCGGAACTT ACCGGGCCAA CTCCGATGAC GTGAGGTACG AGGTGACCGA ACTACTCCCC
GAGGGCGGGG CGGTCAAGGT TTATCCGTAC GCGCGTCCGA CCAAGCCAAA GCTCGAATAG
 
Protein sequence
MNEKTDSESG ARLRKRRKWL WWSIFLSVLV LLVGTATVVL GGYFTEKGKC PESIPSTGVK 
EPVGEANEKW LKLVDSGFTP FDKGPVKGAA EDLSFGYLLK NTSEYVLYNA DIDVSFKDAN
GDDPTALLKK SDQRENASVL DSVNIPVIFP GQTVGMGSSI AIWTEHGEDP ETGEPVDLEK
IDYDKLTLDI DMASGQWWEP SNDKLDFTRV AAKSVDVVDS ESSEHEYLDG REWLSADIEY
LVESKACQDL KAYKPSTVVF DAENKIVGGD ISGSKGDTGE GGTYRANSDD VRYEVTELLP
EGGAVKVYPY ARPTKPKLE