Gene Snas_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0397 
Symbol 
ID8881579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp403108 
End bp404205 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509207 
Protein GI291297929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.652786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.983815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCC CAGCCAAACC GGCGACCGAC GCGGGGGCCA AGCCCGAGCC CGTCACGGCC 
GCCCGACGAA CCCGGACCCG CGTCGCGGGC CTGGGGATTG CCCAGGTCAT CGGGGTCGAG
GTCGTACTGG CGGCGCTGCT GTTCGTCCCC GGCGTCCCGC TGCCGTGGCT GGGCGGCGTG
GCCGCGGCCG TCGCGCTGTT GGGCCTGGGC CGCACCCACG GCAGGTCGTG GTTCGGCTGG
CTGGGGCACT GGCTGCGCTG GCGTTCCCGG GTTCGCGCCG ACCGACGCGA CCGACGCTCC
GGCGGCGAAC CGGGTCCGCG ACCCCGGCTG GCCACCATCG CCGAACGCGG TACCGAGATC
GGGGTCGCCT TCGACGGGAC CGGCTGGTTC GCGGCGGTGA AACTGGAGGG TGAGGCCCCG
CCGTCGGAGG TCTTCGCCGC CGTCACCGGC CTGCTCAACG CCGCCGACAC CCCGGTGACC
TCGGTACAGC TGGTCACCCG CTCGGGAGCG GAGGTCGGCC GCGACAACTG GTTCGCGGTG
CGCCTCGACG TCCCCGGCGC CCACGCGGTG GCCGCCGACC GGGGCGGTGG GGCACTGGGC
GTGCACCGGG CGCTCGGGGG AGCGGTGAGC CGACTCCTCA AGGGAGCCCA GGACGCGGGC
ATCGACATGC GGGCGCTGTC GCAGACCCAG TTGGCCGCCG CGCTGCGGTT CTCGCTCGAC
CTGCACCGAC CCGACTCCGG CGAGCCCACC GAGAGCTGGA AGACCTGGCG CAACGGCGGC
ATGGCCCAGA CGACCTACTG GCTGCGCGGC CGCCGCTCCG CCGCCACCGA GGTCGAACGA
CTGTGGACGA AACTGTCCGA ACTCGACAAG GGCACCCACG CCATCTCGCT GGCGCTGCGT
CCGGCCAGCT CCCGCCCCGG CGACAAACGG CTGATGTTCC GGTGCCTGGT CCGGCTCGTC
GACGAGGCGT CCAATGTCGA GGAACTCGGC CGCGAGCTGA CGAAACTGAC CCGCAAGAAC
CGTCTGAAGC TGCTGCGCTG CAACGGAACT CAGGGTCCGG CCAGCTACGC CTCGGCGTTG
AGCGGAGGTG CGTGGTGA
 
Protein sequence
MTSPAKPATD AGAKPEPVTA ARRTRTRVAG LGIAQVIGVE VVLAALLFVP GVPLPWLGGV 
AAAVALLGLG RTHGRSWFGW LGHWLRWRSR VRADRRDRRS GGEPGPRPRL ATIAERGTEI
GVAFDGTGWF AAVKLEGEAP PSEVFAAVTG LLNAADTPVT SVQLVTRSGA EVGRDNWFAV
RLDVPGAHAV AADRGGGALG VHRALGGAVS RLLKGAQDAG IDMRALSQTQ LAAALRFSLD
LHRPDSGEPT ESWKTWRNGG MAQTTYWLRG RRSAATEVER LWTKLSELDK GTHAISLALR
PASSRPGDKR LMFRCLVRLV DEASNVEELG RELTKLTRKN RLKLLRCNGT QGPASYASAL
SGGAW