Gene Snas_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0388 
Symbol 
ID8881570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp392187 
End bp392771 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509198 
Protein GI291297920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.45744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA GATCACGTCT CCTCCGACGA GGGGTGCTCG CCGCGTTCGG CGTCGGCGCC 
CTGCTGGCGA TCGCCTCCCC GGCACTGGCG ACCGCCCAGC CCGTCGCGGA CACGGCCTCC
GAGACCAAGG CCGTCACCCT CACCTACGAC ACCAGTCAGG CCGAGGAGTT CGTCCAGGAC
GTCCACGACG GCGCCAAGGT CTGGAACGAC AACGTCGAGA ACGTGACGCT CGAACCGGTG
GCCGACGGTC AGACCGCCGA CTTCGAGGTC ATCGCGACCG ACGGCTGGCC GCAGGCCTCG
GTGCCCGAGC TCGGCAAGGG CACCATCGAG TTCGGCCGTC AGGCCGTCGA CGAGGGCCAC
AACACCACCC GGATCTCCGC GCACGAGATC GGCCACATCC TGGGGCTGCC GGACGTCAAG
CCCGGACCCT GCTCCAGCCT GATGTCGGGC GCCTCGGCGG GCACCGACTG TGACAACGCG
ATCCCCAACG CCGAGGAGAA GGCCGAAGTG GAGTCCAACT TCGGCTCCGG CATGGCCGCC
AAGTCGAAGA CCTGGCGCGA CATGTACTTC TGCGACAAGG ACTGA
 
Protein sequence
MTERSRLLRR GVLAAFGVGA LLAIASPALA TAQPVADTAS ETKAVTLTYD TSQAEEFVQD 
VHDGAKVWND NVENVTLEPV ADGQTADFEV IATDGWPQAS VPELGKGTIE FGRQAVDEGH
NTTRISAHEI GHILGLPDVK PGPCSSLMSG ASAGTDCDNA IPNAEEKAEV ESNFGSGMAA
KSKTWRDMYF CDKD