Gene Snas_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0207 
Symbol 
ID8881385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp221384 
End bp221926 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative two component transcriptional regulator, winged helix family 
Protein accessionYP_003509019 
Protein GI291297741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.183143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.472941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT CGACGATCAC CCATGCCCGC CCGCCCCGAC CGGCCCGCCG CCTGGCGGTC 
ACCGTCGAGT TCCCCCGGGG CACCGACGGC CTCGGCGACC AGATGCTGTC GGTCCTGGCG
ACCCTCAAGG AACTCGTCGG CCAGGGCGGC ACCGTCACCG TCGCCTCCGA CCCACCGCAG
GCCCCGGTTC CGCTGCTGCC CAAGAAATCC CACGCCGCGG CCCCGCCCGA CGGCGGCATC
CGCGTCTTCC CCGAGACCCG GATCGTCACC GACGGCCCGC GCCCGGTGCC ATTGAGCCGC
CTCGAGTTCG ACCTGCTGCA CTTCCTCATC GCCCGCCCCG ACCGCGTCCA CACCCGCCAG
CAACTGCTGG AAGTGGTGTG GGGCGTCGGC CGTGGCGACA TCGGCCAGCG CACCGTCGAC
GTCCACGTTC GCCGCCTGCG CGCCAAGATG CCCCGGCTGG CCGAAGCGCT CGTCACCGTG
CGCGGTGTCG GCTATCGCTT CGACAGCACC GACACCGTCG CGTTGATCAG CATCCGCGAC
TGA
 
Protein sequence
MSTSTITHAR PPRPARRLAV TVEFPRGTDG LGDQMLSVLA TLKELVGQGG TVTVASDPPQ 
APVPLLPKKS HAAAPPDGGI RVFPETRIVT DGPRPVPLSR LEFDLLHFLI ARPDRVHTRQ
QLLEVVWGVG RGDIGQRTVD VHVRRLRAKM PRLAEALVTV RGVGYRFDST DTVALISIRD